Table 2. Chromosome and genomic coordinates for 1-insulator lines.
LINE | CHRM. | GENOMIC COORD. | INSERTION TYPE | HOTSPOTa | CHROMATIN TYPEc | INSULATOR PROTEINS |
---|---|---|---|---|---|---|
gi-ve 2 | 3 | 3L: 5,177,560 | Intron (shep) | * | Red | GAF |
gi-ve 2A | 3 | 3R: 24,816,510 | Intergenic | * | Black | GAF |
gi-ve 9A | 2 | -b | Transposon (gypsy) | - | - | - |
gi-ve 20 | 3 | -b | Transposon (Diver) | - | - | - |
gi-ve 29 | 3 | 3R: 7,392,923 | Promoter (sea/fabp) | * | Red | CTCF, GAF, Su(Hw) |
gi-ve 31 | 2 | 2R: 6,762,150 | Promoter (CG30015) | * | Red/Yellow | CP190, BEAF, CTCF, GAF |
gi-ve 40 | 3 | 3L: 13,470,406 | Promoter (stv) | * | Black | GAF |
gi-ve 45 | 3 | -b | Transposon (Doc) | - | - | - |
gi-ve 7D | X | X: 13,072,760 | Intron (CG34411) | - | Black | BEAF, CP190, CTCF |
a Transposon hotspot if more than 5 insertions for other P-element or Pbacs were found at this position in FlyBase.
b Not enough flanking sequence recovered to accurately predict insertion position.
c From: Filion et al (2010) Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell 143: 212-224.