Table 4. Linkage equilibrium/disequilibrium in T. b. rhodesiense populations and the frequency of repeated genotypes.

Population	Sample size	Pairs of loci in LD (all)	Pairs of loci in LD (unique)	Repeated MLGs (number)
Ug/Ke 61–97	43	12/15	8/15	65 (6), 69 (6); 75 (5); 67 (4); 73 (4); 71 (2); 68 (2)
Malawi	23	2/21	1/21	1 (2); 5 (2)
Tororo	26	nd	nd	27 (4); 24 (5), 57(2)
Soroti	84	nd	nd	49 (50); 42 (7); 31 (7); 21 (2)

nd = not done, as analysis not appropriate.