Table 2. Analysis of molecular variance (AMOVA) when grouping isolates according to host and year of isolation using either concatenated MLST sequences or flaB sequences.
assigned variance
|
||
---|---|---|
C. jejuni | MLST | flaB |
among years within hosts | 1.6% (p<0.001) | 2.0% (p<0.001) |
among hosts | 4.6% (p=0.008) | 0.6% (p=0.178) |
within hosts and years | 93.8% (p<0.001) | 97.4% (p<0.001) |
C. coli | ||
among years within hosts | 10.6% (p<0.001) | 24.6% (p<0.001) |
among hosts | 7.9% (p=0.089) | 7.4% (p=0.603) |
within hosts and years | 81.5% (p<0.001) | 68.0% (p<0.001) |
For each source only years with more than 10 samples were included.