Table 2.
Primer name | Sequence (5′-3′) |
---|---|
Primers for DNA fragment PCR to obtain a partial sequence of genomic DNA of the acid proteinase | |
12 ND-F |
AACGATATCGAGTACTATGGT |
M.cir-2R |
TTAAAGACTTCATAGTTGTTCTT |
Primer for 3′-RACE PCR (Gene-specific primer) | |
GSP-Mucor-1 F |
GATGGTCGTGCCTGGTCTATCCAAT |
Primer for 5′-RACE PCR (gene-specific primer) | |
GSP-Mucor-2R |
CATTGTCTCTGGCACCGTATTGAGCAGC |
Primers for full-length cDNA and recombinant plasmids | |
APMC-EcoNaeI-F |
ATGGAATTCGCCGGCGCTACTACTGATGCCACTGGTACTGTCCCCG |
APMC-F |
AGGAATTCTTCTCATTAGTCTCTTCTTG |
APMC-Met-F |
ATGGAATTCATGAAATTCTCATTAGTCTCTTCTTGTGTC |
MCAP-3 F |
TATCTCGAGaaaagaGCTCCCAGTGGTAGCAAGAA |
XhoI-N-MCAP-F |
TATCTCGAGaaaagaATGAAATTCTCATTAGTCTCTTCTTGTG |
APMC-NotI-R |
AAAGCGGCCGCGACAGATTTGGCAATTT |
APMC-Stop-R |
GTGATTTATAGATAGATAGATGAAATGTACCAAA |
Primers to identify clones containing recombinant plasmids | |
pGAP-F |
GTCCCTATTTCAATCAATTGAACAAC |
AOX1pGAP-Rev | CAAATGGCATTCTGACATCCTC |
The underlined sequences (GAATTC; EcoRI, CTCGAG; XhoI and GCGGCCGC; NotI) represent the additional restriction sites at the 5′ ends of forward and reverse primers. The lowercase letters indicate the Kex2 cleavage sites. The primers (for First-strand cDNA synthesis, 3′-RACE cDNA and 5′-RACE cDNA) provided in the SMART RACE cDNA Amplification Kit (Clontech) are not described in the table.