Skip to main content
. 2013 Jun 17;288(31):22734–22744. doi: 10.1074/jbc.M113.466946

TABLE 1.

Crystallographic data for Gla-domainless prothrombin mutant S525A

NAG, n-acetylglucosamine.

Buffer 100 mm Tris, pH 8.5
PEG 8000 (25%)
PDB ID 4HZH

Data collection
    Wavelength (Å) 1.5418
    Space group P212121
    Unit cell dimensions (Å) a = 82.6, b = 103.1, c = 149.5
    Molecules/asymmetric unit 2
    Resolution range (Å) 40-3.3
    Observations 74,483
    Unique observations 19,155
    Completeness (%) 96.9 (93.1)
    Rsym (%) 18.0 (44.9)
    I/σ(I) 5.4 (2.1)

Refinement
    Resolution (Å) 40-3.3
    Rcryst, Rfree 0.294, 0.329
    Reflections (working/test) 18,011/980
    Protein atoms 6880
    NAG molecules 4
    r.m.s.d. bond lengthsa (Å) 0.007
    r.m.s.d. anglesa (°) 1.2
    r.m.s.d. ΔB (Å2) (mm/ms/ss)b 0.74/0.06/0.28
    〈B〉 protein (Å2) 58.4
    〈B〉 NAG (Å2) 54.5
    Ramachandran plot
        Most favored(%) 95.0
        Generously allowed (%) 3.3
        Disallowed (%) 1.6

a Root mean squared deviation (r.m.s.d.) from ideal bond lengths and angles and r.m.s.d. in B-factors of bonded atoms.

b mm, main chain-main chain; ms, main chain-side chain; ss, side chain-side chain.