Table 2.
Modular analysis
| PRE |
MP1 |
EEF2,GSTK1,ATP5I,MRPL12,NME4,EFEMP2,PCOLCE,RASL12,ADD1 |
| MP2 |
AP2M1,AP2B1,TTC1,ACTR1A,MED12,TAF10,VPS72,CSNK2B,ATOX1,UBTF |
|
| MP3 |
CNIH,B3GNT2,RAN,GTF2E1,RB1,ME2,CRTAP,PNMA1,IDH1,RPL15 |
|
| MP4 |
FSTL3,FLT1,TPBG,NDRG1,INHA,HEXB,ENG,INHBA,FLNB,SPAG4 |
|
| MP5 |
TSNAX,SYPL1,PSMA1,PRDX3,DCK,PUM1,CTNNB1,ZNF217,PSMC6,CSNK1A1 |
|
| MP6 |
TAGLN,MYH11,COL1A2,WFDC1,COL1A1,ACTA2,ACTG2,DPYSL3,CDH5,PDLIM3 |
|
| MP7 |
DLD,SFRS10,UQCRC2,PRKRA,CCNG1,DNAJB4,STRAP,SEPT2,RBBP7,SEPP1 |
|
| MP8 |
EZR,KRT19,CYP11A1,TECR,DDR1,PPP1R13L,SLC35A2,ILVBL,ARID3A,EPHB3 |
|
| NORMAL |
MN1 |
NAP1L1,MGAT1,CMPK1,HOXA10,CTSD,RBBP7,UPF1,ATP6V0B,NR1H2,NPTN |
| MN2 |
ZFAND6,JAK1,TSNAX,KLF10,RRAS2,MAP4K3,PSMA1,FNTA,SYPL1,MAEA |
|
| MN3 |
CNIH,RB1,PMP22,IDH1,CAV2,CRTAP,IL33,HPRT1,RPL15,PDGFRA |
|
| MN4 |
MS4A6A,CYBB,TLR7,FOS,DUSP1,FOSB |
|
| MN5 |
CYP11A1,EZR,DDR1,LAD1,TECR,KRT19,ELF3,CLDN7,ILVBL,SPINT2 |
|
| MN6 |
DLD,UQCRC2,MORF4L1,SEPT2,SNAP23,CCNG1,ZNF12,TWF1,NFE2L2,SEP15 |
|
| MN7 | TAGLN,MYH11,COL1A2,ACTG2,DPYSL3,WFDC1,ACTA2,PDLIM3,TNC,RASL12 |
Selected genes with the highest intra-modular connectivity.