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. 2004 Apr;70(4):2245–2253. doi: 10.1128/AEM.70.4.2245-2253.2004

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Copyright © 2004, American Society for Microbiology

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FIG. 2. — (A) Neighbor-joining analysis of 400 bp of rbcL clone sequences by use of 1,000 bootstrap replicates. Bootstrap values of >70% are indicated at the nodes. Clone sequences are indicated in bold. Abbreviations for clone sequences: CR, Caldera Rim; F, Forest; HM, Halema'uma'u; PP, Pu'u Puai. Accession numbers for the isolate sequences are provided in the legend to Fig. 1. Clone sequence accession numbers are AY422838 through AY422948. (B) Expanded view of clone sequences shown in panel A. Clone relationships derived from a neighbor-joining analysis are presented as a phylogram with sequences from Burkholderia fungorum and Oligotropha carboxydovorans used to root the tree. Abbreviations and accession numbers are as defined for panel A. Sequences with multiple designations occurred multiple times in one or more of the libraries.