Table 4. PCR amplification.
Name | Year | Serotype | lacC | lacE (J1) | lacG (J1) | lacE (J2) | lacG (J2) | sorC | sorE | GCK | ptsG | cas1 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Korean strains | KCTC11537 (ref) | 2006 | I | - | - | - | - | - | + | + | + | + | - |
KCTC11538 | 2008 | I | - | - | - | - | - | + | + | + | + | - | |
J19 | 2009 | I | - | - | - | - | - | + | + | + | + | - | |
J20 | 2009 | I | - | - | - | - | - | + | + | + | + | - | |
J24 | 2009 | I | - | - | - | - | - | + | + | + | + | - | |
J25 | 2009 | I | - | - | - | - | - | + | + | + | + | - | |
J21 | 2009 | II | - | - | - | - | - | + | + | + | + | + | |
J22 | 2009 | II | - | - | - | - | - | - | - | + | + | + | |
J23 | 2009 | II | - | - | - | - | - | - | - | + | + | + | |
J27 | 2009 | II | + | - | - | + | + | - | - | + | + | + | |
J28 | 2009 | II | - | - | - | - | - | - | - | + | + | + | |
J30 | 2009 | II | - | - | - | - | - | - | - | + | + | + | |
Japanese strains | KRS-02083 | 2002 | I | + | + | + | - | - | - | - | + | + | - |
KRS-03032 | 2003 | I | - | - | - | - | - | + | + | + | + | - | |
KRS-02030 | 2002 | I | + | + | + | - | - | - | - | + | + | - | |
KRS-04024 | 2004 | I | - | - | - | - | - | + | + | + | + | - | |
KRS-02067 | 2002 | I | + | + | + | - | - | + | + | + | + | - | |
KRS-04037 | 2004 | I | - | - | - | - | - | + | + | + | + | - | |
KRS-02109 | 2002 | II | + | - | - | + | + | - | - | + | + | + | |
KRS-02068 | 2002 | II | + | - | - | + | + | - | - | + | + | + | |
KRS-02090 | 2002 | II | + | - | - | + | + | - | - | + | + | + | |
KRS-02087 | 2002 | II | + | - | - | + | + | - | - | + | + | + | |
KRS-02091 | 2002 | II | + | - | - | + | + | - | - | + | + | + | |
KRS-02102 | 2002 | II | + | - | - | + | + | - | - | + | + | + |
Lactose-, sorbose- and glucose-related genes, along with gene markers of the CRISPR/Cas system, were PCR amplified from 24 stored S. parauberis strains that had been isolated from diseased olive flounder in Korean (six strains each of type I and type II) between 2006 and 2009, and Japan (six strains each of type I and type II) between 2002 and 2004.
Symbols: ‘-’ indicates no amplification; ‘+ ’ indicates amplification.