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. 2013 Nov 18;8(11):e79345. doi: 10.1371/journal.pone.0079345

Figure 1. StochPy simulation output.

Figure 1

An example of explicit simulation output of StochPy is shown in a table. It reports the number of molecules of each molecular species and the reaction propensities at each time point when a reaction occurs. The time differences between consecutive rows indicate waiting times between reaction events. In the last column, the waiting times for reaction 4, Inline graphic, are given and they correspond to the time period between consecutive instances of activity of reaction 4.