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| Sequencing depth | Sample size | Precision | Recall |
| 1X | 1,000 | 0.737 (0.0437) | 0.749 (0.0472) |
| 2X | 500 | 0.778 (0.0461) | 0.771 (0.0446) |
| 10X | 100 | 0.779 (0.0441) | 0.725 (0.0408) |
| 50X | 20 | 1 (0) | 0.540 (0.0582) |
Precision and Recall values for detecting polymorphic sites at different scenarios of sequencing depth and sample size. Values are averaged across 100 different replicates and standard deviations are reported in parentheses.
