Table 3. Codon-anticodon recognition pattern and codon usage for the chloroplast genome of Arbutus unedo.
Amino acid | tRNA | Codon | No.* | Amino acid | tRNA | Codon | No.* | Amino acid | tRNA | Codon | No.* |
Ala | trnA-UGC | GCU | 497 | Lys | trnK-UUU | AAA | 678 | Ser | trnS-GCU | AGU | 254 |
trnA-UGC | GCA | 305 | trnK-UUU | AAG | 191 | trnS-GCU | AGC | 69 | |||
trnA-UGC | GCC | 172 | Leu | trnL-CAA | UUG | 380 | trnS-GGA | UCU | 402 | ||
trnA-UGC | GCG | 130 | trnL-UAA | UUA | 685 | trnS-GGA | UCC | 197 | |||
Cys | trnC-GCA | UGU | 160 | trnL-UAG | CUU | 405 | trnS-UGA | UCA | 232 | ||
trnC-GCA | UGC | 43 | trnL-UAG | CUA | 242 | trnS-UGA | UCG | 96 | |||
Asp | trnD-GUC | GAU | 521 | trnL-UAG | CUC | 116 | Thr | trnT-GGU | ACU | 407 | |
trnD-GUC | GAC | 134 | trnL-UAG | CUG | 97 | trnT-GGU | ACC | 176 | |||
Glu | trnE-UUC | GAA | 670 | Met | trnM-CAU | AUG | 441 | trnT-UGU | ACA | 286 | |
trnE-UUC | GAG | 220 | Asn | trnN-GUU | AAU | 591 | trnT-UGU | ACG | 91 | ||
Phe | trnF-GAA | UUU | 676 | trnN-GUU | AAC | 168 | Val | trnV-GAC | GUU | 385 | |
trnF-GAA | UUC | 311 | Pro | trnP-UGG | CCU-P | 295 | trnV-GAC | GUC | 133 | ||
Gly | trnG-GCC | GGU | 445 | trnP-UGG | CCA-P | 223 | trnV-UAC | GUA | 392 | ||
trnG-GCC | GGC | 153 | trnP-UGG | CCC-P | 145 | trnV-UAC | GUG | 137 | |||
trnG-UCC | GGA | 549 | trnP-UGG | CCG-P | 95 | Trp | trnW-CCA | UGG | 317 | ||
trnG-UCC | GGG | 220 | Gln | trnQ-UUG | CAA | 497 | Tyr | trnY-GUA | UAU | 542 | |
His | trnH-GUG | CAU | 341 | trnQ-UUG | CAG | 136 | trnY-GUA | UAC | 117 | ||
trnH-GUG | CAC | 87 | Arg | trnR-ACG | CGA | 282 | Stop | – | UAA | 38 | |
Ile | trnI-CAU | AUA | 490 | trnR-ACG | CGU | 280 | – | UAG | 17 | ||
trnI-GAU | AUU | 759 | trnR-ACG | CGG | 65 | – | UGA | 18 | |||
trnI-GAU | AUC | 292 | trnR-ACG | CGC | 62 | ||||||
trnR-UCU | AGA | 306 | |||||||||
trnR-UCU | AGG | 86 |
Numerals indicate the frequency of usage of each codon in 17,947 codons in 73 potential protein-coding genes.