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Repeat Properties of Rat Genome, Duplications, and Flanking Regions
The repeat contents of four regions of the rat genome were compared: duplicated regions as detected by whole-genome analysis comparison; duplicated blocks where pairwise alignments within 100 kb were merged; 20-kb flanking regions immediately flanking the clustered duplications and the genome average. Enrichment was defined as the repeat content of duplicated sequence divided by the repeat content of unique sequence.
