Table 1A.
Outlined Description of the Genetic Map in the (GK × BN) F2 Cross and Integration of Linkage and In Silico Maps of the Rat Autosomes
| RNO | Markersa | Resolved positions | Average (cM)a | Average (Mb)a | In silico mappingb | Average (Mb)b |
|---|---|---|---|---|---|---|
| 1 | 333 | 103 | 1.52 | 2.63 | 263 | 1.02 |
| 2 | 192 | 90 | 1.26 | 2.90 | 150 | 1.73 |
| 3 | 110 | 64 | 1.97 | 2.71 | 91 | 1.90 |
| 4 | 159 | 69 | 1.67 | 2.76 | 115 | 1.64 |
| 5 | 172 | 69 | 1.45 | 2.55 | 132 | 1.32 |
| 6 | 102 | 48 | 1.47 | 3.14 | 81 | 1.85 |
| 7 | 104 | 58 | 1.66 | 2.51 | 77 | 1.88 |
| 8 | 108 | 56 | 1.64 | 2.35 | 86 | 1.52 |
| 9 | 75 | 41 | 2.11 | 2.84 | 52 | 2.23 |
| 10 | 128 | 92 | 1.57 | 1.22 | 98 | 1.14 |
| 11 | 40 | 24 | 2.94 | 3.82 | 34 | 2.66 |
| 12 | 50 | 26 | 1.95 | 1.87 | 34 | 1.41 |
| 13 | 78 | 33 | 2.02 | 3.48 | 55 | 2.06 |
| 14 | 72 | 34 | 2.15 | 3.40 | 53 | 2.16 |
| 15 | 53 | 34 | 2.63 | 3.33 | 44 | 2.55 |
| 16 | 45 | 24 | 2.78 | 3.92 | 36 | 2.58 |
| 17 | 92 | 44 | 1.54 | 2.26 | 78 | 1.26 |
| 18 | 59 | 31 | 1.81 | 2.91 | 44 | 2.03 |
| 19 | 41 | 26 | 1.98 | 2.37 | 30 | 2.04 |
| 20 | 45 | 30 | 2.41 | 1.91 | 31 | 1.84 |
| Total | 2058 | 996 | 1.77 | 2.57 | 1584 | 1.62 |
Number of microsatellite markers mapped in the (GK × BN) F2 cross and average spacing between resolved genetic positions. Average physical distances were calculated with the chromosome length determined in the June 2003 rat genome assembly
Markers localized in the genetic map (GK × BN) F2 cross that could be mapped by ePCR and average physical distances calculated as described above