Table 3.
B . burgdorferi chromosomal groups
|
Typing Method
a
|
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
|
Strain | ||||||||
|
B31 |
1 |
1 |
1 |
1 |
1 |
1 |
1/2 |
A |
|
64b |
3b |
1 |
1 |
1 |
1 |
1 |
1/2 |
A |
|
Bol26 |
1 |
– |
3 |
1 |
1 |
1 |
1/2 |
A |
|
ZS7 |
1 |
1 |
3 |
1 |
1 |
1 |
1/2 |
A |
|
156a |
2 |
2 |
2 |
2 |
2 |
2a |
2/1 |
D |
|
297 |
2 |
2 |
– |
2 |
2 |
2b |
– |
Dc |
|
JD1 |
5 |
1 |
6 |
3 |
2 |
2c |
2/1 |
D |
|
72a |
4 |
2 |
4 |
3 |
3 |
3a |
1/1 |
C |
|
94a |
8b |
3 |
4 |
3 |
3 |
3a |
1/1 |
C |
|
118a |
5 |
2 |
4 |
3 |
3 |
3b |
1/1 |
C |
|
CA-11.2A |
5 |
2 |
2 |
3 |
3 |
3a |
1/– |
C |
|
N40 |
9 |
3 |
5 |
3 |
4 |
4 |
2/2 |
B |
|
WI91-23 |
7 |
2 |
4 |
3 |
5 |
4 |
2/1 |
B |
| 29805 | 6 | 3 | 7 | 3 | 6 | 4 | 1/1 | B |
a. Chromosomal typing methods are as follows:
1. Ribosomal rRNA spacer IGS1 [35,37].
2. Arbitrary MLST group name [33,38].
3. Arbitrary MLST group name (Figure 1 this report).
4. RST type deduced from our sequences [67,68].
5. Plasmid content similarity, arbitrary group name (S. Casjens, unpublished).
6. Chromosomal right end organization, arbitrary group name (S. Casjens, unpublished).
7. Two chromosomal indels: 157 bp in gene 0021 and 27–30 bp between genes 0001 and 0002 (1 = no deletion; 2= deletion).
8. Chromosomal, cp26 and lp54 SNP type, this report.
- not determined.
b. IGS1 lineages 1 and 3 form a coherent superlineage, and IGS1 8 is a rather close relative of lineage IGS1 5 [35].
c. 297 chromosomal SNP type not determined.