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. 2013 Nov 19;8(11):e80316. doi: 10.1371/journal.pone.0080316

Table 2. Primers used for real-time PCR gene expression analysis.

Gene1 Sequences of primers (5′ to 3′) Accession number2 Amplicon region Median Ct Efficiency3
AGPAT1 Forward, GGAGTCATCTTCATTGACCGGA NM_177518.1 737–847 29.3 99%
Reverse, GCCCTCAGGAAAAACCCA
ApoB Forward, TCCTTGATTCCACATGCAGCT XM_003582812.1 11567–11666 20.6 94%
Reverse, GGTGTGCAAAGGATGCGTTAG
CPT1a Forward, CTTCCCATTCCGCACTTTC XM_002699420.2 1950–2033 22.6 93%
Reverse, CCATGTCCTTGTAATGAGCCA
PC Forward, CTTCAAGGACTTCACTGCCACC NM_177946.4 3160–3276 21.4 98%
Reverse, GCCAAGGCTTTGATGTGCA
PCK1 Forward, CGAGAGCAAAGAGATACGGTGC NM_174737.2 427–542 18.5 98%
Reverse, TGACATACATGGTGCGACCCT
RPS9 Forward, GAACAAACGTGAGGTCTGGAGG NM_001101152.2 170–261 19.2 92%
Reverse, TTACCTTCGAACAGACGCCG
TNFα Forward, AAGTAACAAGCCGGTAGCCCA NM_173966.3 448–538 27.9 103%
Reverse, CTTCCAGCTTCACACCGTTG
1

AGPAT1: 1-acylglycerol-3-phosphate O-acyltransferase 1; ApoB: apolipoprotein B; CPT1a: mitochondrial carnitine palmitoyltransferase 1A; PC: pyruvate carboxylase; PCK1: phosphoenolpyruvate carboxykinase 1; RPS9: ribosomal protein S 9; TNFα: tumor necrosis factor α.

2

From NCBI Entrez Nucleotide Database (http://www.ncbi.nlm.nih.gov/sites/entrez?db=nucleotide).

3

The coefficients of determination (R2) for all genes were greater than 0.98.