Skip to main content
. 2013 Nov 19;8(11):e78302. doi: 10.1371/journal.pone.0078302

Table 7. Psoriasis 3 classes genes selected by multi-TGDR after Bagging.

Probe Symbol Description β_NL β_LS Freq
203872_at ACTA1 actin, alpha 1, skeletal muscle 0.1043 −0.2438 0.51
229963_at BEX5 brain expressed, X-linked 5 −0.0688 −0.8066 0.75
207356_at DEFB4A defensin, beta 4A 0.3202 0.672 0.46
235603_at HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.2325 −0.4157 0.68
205863_at S100A12 S100 calcium binding protein A12 −0.9565 1.6449 0.42
205916_at S100A7 S100 calcium binding protein A7 0.4054 0.9465 0.81
226825_s_at TMEM165 transmembrane protein 165 −0.0338 0.0811 0.58
206373_at ZIC1 Zic family member 1 0.2361 0.0792 0.59
203239_s_at CNOT3 CCR4-NOT transcription complex, subunit 3 −0.2049 −0.3561 0.43
201693_s_at EGR1 early growth response 1 −0.182 −0.094 0.47
234335_s_at FAM84A family with sequence similarity 84, member A 0.542 −0.0105 0.99
214711_at GATC glutamyl-tRNA (Gln) amidotransferase, subunit C homolog (bacterial) −0.1048 0.0458 0.45
230828_at GRAMD2 GRAM domain containing 2 0.4728 −0.0949 0.85
207764_s_at HIPK3 homeodomain interacting protein kinase 3 0.032 −0.3303 0.54
212492_s_at KDM4B lysine (K)-specific demethylase 4B −0.6416 −0.4202 0.88
214352_s_at KRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog −0.1416 −0.0083 0.55
224171_at LSM14B LSM14B, SCD6 homolog B (S. cerevisiae) 0.443 0.0658 0.93
1556175_at MTSS1L metastasis suppressor 1-like 0.3438 0.015 0.85
202600_s_at NRIP1 nuclear receptor interacting protein 1 −0.1361 −0.3617 0.61
230699_at PGLS 6-phosphogluconolactonase 0.4517 −0.049 0.79
229392_s_at PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 0.6238 −0.101 0.78
1552797_s_at PROM2 prominin 2 0.5688 0.0752 0.84
229806_at QRICH1 glutamine-rich 1 1.2418 −0.6387 0.86
226404_at RBM39 RNA binding motif protein 39 0.4885 −0.0797 0.96
202648_at RPS19 ribosomal protein S19 0.2297 −0.0548 0.9
201846_s_at RYBP RING1 and YY1 binding protein −1.4064 −1.2206 0.99
1563646_a_at TMEM67 transmembrane protein 67 0.2242 0.0222 0.48
243417_at ZADH2 zinc binding alcohol dehydrogenase domain containing 2 0.5824 −0.0841 0.92
230586_s_at ZNF703 zinc finger protein 703 1.3228 −0.0688 0.99
215363_x_at FOLH1 folate hydrolase (prostate-specific membrane antigen) 1 0.2521 0.5247 0.71
211661_x_at PTAFR platelet-activating factor receptor −0.1189 0.1913 0.51
203335_at PHYH phytanoyl-CoA 2-hydroxylase 0.4112 −0.9118 0.61
202275_at G6PD glucose-6-phosphate dehydrogenase 0.0251 −0.2045 0.52
1556069_s_at HIF3A hypoxia inducible factor 3, alpha subunit −0.0016 0.6154 0.62
213424_at KIAA0895 KIAA0895 0.0646 −0.1698 0.48
215695_s_at GYG2 glycogenin 2 0.0756 −0.0037 0.55
205132_at ACTC1 actin, alpha, cardiac muscle 1 0.1735 −0.2476 0.6
1431_at CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 0.0139 0.0433 0.45
230005_at SVIP small VCP/p97-interacting protein −0.0019 −0.1661 0.43

There are 39 genes in the final model. Normal tissue from healthy controls serves as the reference. Bagging frequency >40%.