Table 7. Psoriasis 3 classes genes selected by multi-TGDR after Bagging.
Probe | Symbol | Description | β_NL | β_LS | Freq |
203872_at | ACTA1 | actin, alpha 1, skeletal muscle | 0.1043 | −0.2438 | 0.51 |
229963_at | BEX5 | brain expressed, X-linked 5 | −0.0688 | −0.8066 | 0.75 |
207356_at | DEFB4A | defensin, beta 4A | 0.3202 | 0.672 | 0.46 |
235603_at | HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | 0.2325 | −0.4157 | 0.68 |
205863_at | S100A12 | S100 calcium binding protein A12 | −0.9565 | 1.6449 | 0.42 |
205916_at | S100A7 | S100 calcium binding protein A7 | 0.4054 | 0.9465 | 0.81 |
226825_s_at | TMEM165 | transmembrane protein 165 | −0.0338 | 0.0811 | 0.58 |
206373_at | ZIC1 | Zic family member 1 | 0.2361 | 0.0792 | 0.59 |
203239_s_at | CNOT3 | CCR4-NOT transcription complex, subunit 3 | −0.2049 | −0.3561 | 0.43 |
201693_s_at | EGR1 | early growth response 1 | −0.182 | −0.094 | 0.47 |
234335_s_at | FAM84A | family with sequence similarity 84, member A | 0.542 | −0.0105 | 0.99 |
214711_at | GATC | glutamyl-tRNA (Gln) amidotransferase, subunit C homolog (bacterial) | −0.1048 | 0.0458 | 0.45 |
230828_at | GRAMD2 | GRAM domain containing 2 | 0.4728 | −0.0949 | 0.85 |
207764_s_at | HIPK3 | homeodomain interacting protein kinase 3 | 0.032 | −0.3303 | 0.54 |
212492_s_at | KDM4B | lysine (K)-specific demethylase 4B | −0.6416 | −0.4202 | 0.88 |
214352_s_at | KRAS | v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog | −0.1416 | −0.0083 | 0.55 |
224171_at | LSM14B | LSM14B, SCD6 homolog B (S. cerevisiae) | 0.443 | 0.0658 | 0.93 |
1556175_at | MTSS1L | metastasis suppressor 1-like | 0.3438 | 0.015 | 0.85 |
202600_s_at | NRIP1 | nuclear receptor interacting protein 1 | −0.1361 | −0.3617 | 0.61 |
230699_at | PGLS | 6-phosphogluconolactonase | 0.4517 | −0.049 | 0.79 |
229392_s_at | PIK3R2 | phosphoinositide-3-kinase, regulatory subunit 2 (beta) | 0.6238 | −0.101 | 0.78 |
1552797_s_at | PROM2 | prominin 2 | 0.5688 | 0.0752 | 0.84 |
229806_at | QRICH1 | glutamine-rich 1 | 1.2418 | −0.6387 | 0.86 |
226404_at | RBM39 | RNA binding motif protein 39 | 0.4885 | −0.0797 | 0.96 |
202648_at | RPS19 | ribosomal protein S19 | 0.2297 | −0.0548 | 0.9 |
201846_s_at | RYBP | RING1 and YY1 binding protein | −1.4064 | −1.2206 | 0.99 |
1563646_a_at | TMEM67 | transmembrane protein 67 | 0.2242 | 0.0222 | 0.48 |
243417_at | ZADH2 | zinc binding alcohol dehydrogenase domain containing 2 | 0.5824 | −0.0841 | 0.92 |
230586_s_at | ZNF703 | zinc finger protein 703 | 1.3228 | −0.0688 | 0.99 |
215363_x_at | FOLH1 | folate hydrolase (prostate-specific membrane antigen) 1 | 0.2521 | 0.5247 | 0.71 |
211661_x_at | PTAFR | platelet-activating factor receptor | −0.1189 | 0.1913 | 0.51 |
203335_at | PHYH | phytanoyl-CoA 2-hydroxylase | 0.4112 | −0.9118 | 0.61 |
202275_at | G6PD | glucose-6-phosphate dehydrogenase | 0.0251 | −0.2045 | 0.52 |
1556069_s_at | HIF3A | hypoxia inducible factor 3, alpha subunit | −0.0016 | 0.6154 | 0.62 |
213424_at | KIAA0895 | KIAA0895 | 0.0646 | −0.1698 | 0.48 |
215695_s_at | GYG2 | glycogenin 2 | 0.0756 | −0.0037 | 0.55 |
205132_at | ACTC1 | actin, alpha, cardiac muscle 1 | 0.1735 | −0.2476 | 0.6 |
1431_at | CYP2E1 | cytochrome P450, family 2, subfamily E, polypeptide 1 | 0.0139 | 0.0433 | 0.45 |
230005_at | SVIP | small VCP/p97-interacting protein | −0.0019 | −0.1661 | 0.43 |
There are 39 genes in the final model. Normal tissue from healthy controls serves as the reference. Bagging frequency >40%.