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. 2013 Aug 22;41(21):9610–9621. doi: 10.1093/nar/gkt733

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© The Author(s) 2013. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — This color plot shows the probabilities of the three types of transitions as functions of IR length () and superhelix density σ for the model sequence described in the text. The colors correspond to the probabilities of each transition type as shown in the Venn diagram at the top, with the depth of hue increasing with transition probability. Here X-form denotes the cruciform extrusion transition.

Inline graphic — This color plot shows the probabilities of the three types of transitions as functions of IR length () and superhelix density σ for the model sequence described in the text. The colors correspond to the probabilities of each transition type as shown in the Venn diagram at the top, with the depth of hue increasing with transition probability. Here X-form denotes the cruciform extrusion transition.