Table 1.
Number of motifs successfully discovered by Dimont on the data sets compiled by Ma et al. (4) compared with the results of POSMO, ChIPMunk, MEME, DME, DREME and HMS
Algorithm | Total successes | Average rank |
---|---|---|
Dimont | 26 | 1.23 |
POSMO | 23 | 1.00 |
ChIPMunk | 23 | 1.00 |
MEME | 22 | 1.32 |
DME | 22 | 1.45 |
DREME | 22 | 1.45 |
HMS | 12 | 1.00 |
We define a discovery successful iff the normalized Euclidean distance between the predicted motif and the motif described in the literature is smaller than 0.25.