Table 4. Differentially expressed proteins under control and infected conditions.
| Group ID | I/C (rate of % vol.) | Accession No. | Protein score | Protein score C. I. % | Total ion score C. I. % | Protein name |
| I198 | 0.111434/0 | gi|42391858 | 200 | 100 | 100 | cold shock domain protein 3 |
| I206 | 0.094232/0 | gi|222834414 | 172 | 100 | 100 | predicted protein |
| I223 | 0.045147/0 | gi|158513193 | 468 | 100 | 100 | pyruvate decarboxylase isozyme 2 |
| I216(I217 I219) | 0.210277/0 | gi|68655495 | 159 | 100 | 100 | methionine synthase 1 enzyme |
| I209 | 0.135266/0 | gi|313661595 | 503 | 100 | 100 | lipoxygenase-1 |
| I181 | 0.079847/0 | gi|326510251 | 394 | 100 | 100 | predicted protein |
| I190 | 0.191266/0 | gi|326514130 | 324 | 100 | 99.998 | predicted protein |
| I226 | 0.118491/0 | gi|357113565 | 483 | 100 | 100 | predicted: succinate dehydrogenase, ubiquinone, flavoprotein subunit, mitochondrial |
| I267 | 0.481638/0 | gi|14018051 | 466 | 100 | 100 | putative alanine aminotransferase |
| I239 | 0.166667/0 | gi|119388723 | 486 | 100 | 100 | alcohol dehydrogenase ADH1A |
| I276 | 0.23262/0 | gi|6561606 | 149 | 100 | 100 | ATPase alpha subunit |
| I288 | 0.937654/0 | gi|57635161 | 235 | 100 | 100 | peroxidase 8 |
| I299 | 0.189651/0 | gi|129916 | 138 | 100 | 85.61 | phosphoglycerate kinase |
| I302 | 0.466078/0 | gi|326527793 | 893 | 100 | 100 | predicted protein |
| I313 | 0.129406/0 | gi|4158232 | 322 | 100 | 100 | glycosylated polypeptide |
| I317 | 0.488077/0 | gi|229358240 | 731 | 100 | 100 | cytosolic malate dehydrogenase |
| I326 | 0.217391/0 | gi|226316439 | 420 | 100 | 100 | fructose-bisphosphate aldolase |
| I309 | 0.473017/0 | gi|326492375 | 150 | 100 | 99.962 | predicted protein |
| I320 (I343) | 0.812175/0 | gi|300681519 | 317 | 100 | 100 | fructose-bisphosphate aldolase, chloroplast precursor |
| I339 | 0.634438/0 | gi|326497973 | 746 | 100 | 100 | predicted protein |
| I347 | 0.301374/0 | gi|159895412 | 329 | 100 | 100 | NADPH-dependent thioredoxin reductase isoform 2 |
| I346 | 0.236009/0 | gi|242058197 | 104 | 99.996 | 100 | hypothetical protein |
| I242 | 0.288839/0 | gi|585032 | 399 | 100 | 100 | cysteine synthase |
| I364 | 0.409977/0 | gi|326492319 | 278 | 100 | 100 | predicted protein |
| I360 | 0.122988/0 | gi|357133190 | 137 | 100 | 99.907 | predicted protein |
| I390 | 0.47657/0 | gi|20067415 | 384 | 100 | 100 | glutathione transferase |
| I429 | 0.479179/0 | gi|728594 | 218 | 100 | 100 | glycine rich protein, RNA binding protein |
| I310 | 6.23836 | gi|146216737 | 367 | 100 | 100 | SGT1 |
| I254 | 5.987146 | gi|222872490 | 136 | 100 | 100 | predicted protein |
| I350 | 5.771895 | gi|326505660 | 177 | 100 | 100 | predicted protein |
| I395 | 3.330519 | gi|27544804 | 405 | 100 | 100 | phospholipid hydroperoxide glutathione peroxidase |
| I232 | 3.201333 | gi|133872360 | 551 | 100 | 100 | Bp2A protein, partial |
| I409 | 3.036805 | gi|9230743 | 64 | 58.026 | 100 | sucrose synthase-2 |
| I391 | 2.829641 | gi|259017810 | 274 | 100 | 100 | dehydroascorbate reductase |
| I199 | 2.5657 | gi|108862362 | 146 | 100 | 100 | oxidoreductase, zinc-binding dehydrogenase family |
| I200 | 2.513553 | gi|49425361 | 382 | 100 | 100 | spermidine synthase |
| I246 | 2.456281 | gi|11124572 | 399 | 100 | 100 | triosephosphat-isomerase |
| I380 | 2.320409 | gi|3688398 | 483 | 100 | 100 | ascorbate peroxidase |
| I353 | 2.202462 | gi|357158835 | 501 | 100 | 100 | predicted: glucose-6-phosphate isomerase-like |
| I422 | 2.117428 | gi|326494858 | 187 | 100 | 100 | predicted protein |
| N193 | 0/0.080562 | gi|326495130 | 503 | 100 | 100 | predicted protein |
| N214 (N216) | 0/0.835538 | gi|357167359 | 261 | 100 | 100 | predicted: ras GTPase-activating protein-binding |
| N206 | 0/0.384636 | gi|326533372 | 365 | 100 | 100 | predicted protein |
| N219(N229) | 0/0.303445 | gi|18076790 | 612 | 100 | 100 | phosphoglucomutase |
| N259 | 0/0.195904 | gi|164565159 | 418 | 100 | 100 | ribulose-1,5-bisphosphate carboxylase/oxygenase |
| N242 | 0/0.121703 | gi|212275097 | 224 | 100 | 100 | uncharacterized protein |
| N269 | 0/0.190315 | gi|357110692 | 510 | 100 | 100 | 6-phosphogluconate dehydrogenase,decarboxylating |
| N289 | 0/0.278852 | gi|28172907 | 510 | 100 | 100 | cytosolic 3-phosphoglycerate kinase |
| N293 | 0/0.557188 | gi|326500176 | 428 | 100 | 100 | predicted protein |
| N302 | 0/0.055462 | gi|326528557 | 521 | 100 | 100 | predicted protein |
| N307 (N306) | 0/0.242551 | gi|357148637 | 458 | 100 | 100 | pyruvate dehydrogenase E1 component subunit beta, mitochondrial |
| N335 | 0/0.869609 | gi|326512374 | 585 | 100 | 100 | predicted protein |
| N347 | 0/0.470007 | gi|326506676 | 275 | 100 | 100 | predicted protein |
| N322 (N331) | 0/0.090235 | gi|326499686 | 327 | 100 | 100 | predicted protein |
| N338 (N342) | 0/0.120011 | gi|326518738 | 542 | 100 | 100 | predicted protein |
| N356 (N355) | 0/0.645651 | gi|232033 | 219 | 100 | 100 | elongation factor 1-beta |
| N352 | 0/0.393733 | gi|326507956 | 314 | 100 | 100 | predicted protein |
| N361 | 0/0.381971 | gi|15808779 | 273 | 100 | 100 | ascorbate peroxidase |
| N350 | 0/0.479167 | gi|18146827 | 527 | 100 | 100 | chitinase 2 |
| N353 | 0/0.119597 | gi|326489985 | 227 | 100 | 100 | predicted protein |
| N346 | 0/0.221933 | gi|357130336 | 190 | 100 | 100 | 26S proteasome non-ATPase regulatory subunit 14 |
| N385 | 0/0.214757 | gi|2499932 | 741 | 100 | 100 | adenine phosphoribosyl transferase 1 |
| N416 | 0/0.113163 | gi|125548641 | 115 | 100 | 96.242 | hypothetical protein OsI_16233 |
| N420 | 0/0.261293 | gi|326534206 | 224 | 100 | 100 | predicted protein |
| N409 | 0/0.977368 | gi|326497111 | 567 | 100 | 100 | predicted protein |
| N406 | 0/0.44138 | gi|22535646 | 81 | 99.143 | 99.653 | hypothetical protein |
| N411 | 0/0.264197 | gi|48475065 | 80 | 99.016 | 75.904 | contains ubiquitin carboxyl-terminal hydrolase |
| N404 | 0/0.154189 | gi|326496833 | 161 | 100 | 100 | predicted protein |
| N408 | 0/0.278555 | gi|326517577 | 81 | 99.143 | 81.951 | predicted protein |
| N403 | 0/1.02402 | gi|40363759 | 561 | 100 | 100 | putative glycine-rich protein |
| N441 | 0/0.226741 | gi|8980491 | 116 | 100 | 100 | thioredoxin h |
| I321 | 0.492256 | gi|40317418 | 158 | 100 | 99.997 | glutamine synthetase isoform GSr2 |
| I356 | 0.398343 | gi|300807845 | 210 | 100 | 100 | profilin |
| I282 | 0.340188 | gi|326499079 | 236 | 100 | 100 | predicted protein |
| I385 (I386) | 0.329162 | gi|20067423 | 293 | 100 | 100 | glutathione transferase |
| I268 | 0.296689 | gi|525291 | 1,030 | 100 | 100 | ATP synthase beta subunit |
| I258 | 0.282746 | gi|9408184 | 147 | 100 | 100 | F0-F1 ATPase alpha subunit |
| I401 | 0.181083 | gi|112821176 | 217 | 100 | 100 | hypothetical protein |
| I273 | 0.169152 | gi|164422240 | 545 | 100 | 100 | ATP1 |
| I363 | 0.099712 | gi|40781605 | 530 | 100 | 100 | 14-3-3 protein |
I/C: infected/control. C.I.: chemical ionization; I: infected; N: non-infected.