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. 2013 Nov 20;8(11):e79390. doi: 10.1371/journal.pone.0079390

Table 5. The compared proteins between proteinomics and RNA-seq datasets.

Protein spot ID (rate of % vol.) Gene ID (|log2|ratio) Pathways
gi|42391858 (0.111434/0) BE431040 (2.13714081)
gi|158513193 (0.045147/0) TC379241 (1.108033409), TC385701 (1.068969307), TC419215 (1.014521523) Tryptophan metabolism, Glycolysis/Gluconeogenesis, Metabolic pathways (no map in kegg database)
gi|313661595 (0.135266/0) CA733413 (2.196724855), TC388136 (2.156815406) Alpha-Linolenic acid metabolism, Linoleic acid metabolism, Metabolic pathways (no map in kegg database)
gi|357113565 (0.118491/0) TC384162 (−1.03191405)
gi|14018051 (0.481638/0) TC419278 (1.587471506), TC451694 (1.49691429) Alanine, aspartate and glutamate metabolism, Metabolic pathways (no map in kegg database), Carbon fixation in photosynthetic organisms
gi|119388723 (0.166667/0) TC434396 (1.831048091), TC383270 (1.529094696) Phenylpropanoid biosynthesis, Biosynthesis of secondary metabolites (no map in kegg database), Metabolic pathways (no map in kegg database)
gi|9408184 (0.282746) TC460547 (3.29707538)
gi|57635161 (0.937654/0) TC389044 (1.315388003) Phenylalanine metabolism, Phenylpropanoid biosynthesis, Metabolic pathways (no map in kegg database), Biosynthesis of secondary metabolites (no map in kegg database)
gi|4158232 (0.129406/0) TC369736 (−1.380338094)
gi|229358240 (0.488077/0) TC457520 (3.014521523), TC372580 (−1.122982) Citrate cycle (TCA cycle), Pyruvate metabolism, Biosynthesis of secondary metabolites (no map in kegg database), Glyoxylate and dicarboxylate metabolism, Metabolic pathways (no map in kegg database), Carbon fixation in photosynthetic organisms
gi|585032 (0.288839/0) TC419796 (2.599484024), TC373702 (1.751487117), TC376351 (1.501967518) Sulfur metabolism, Cyanoamino acid metabolism, Selenoamino acid metabolism, Cysteine and methionine metabolism, Metabolic pathways (no map in kegg database)
gi|357133190 (0.122988/0) TC420420 (−1.340011237) TC397562 (−1.160565183) Proteasome
gi|40317418 (0.492256) TC419727 (3.101984365), TC369687 (2.059845514) Glutathione metabolism
gi|728594 (0.479179/0) TC400906 (1.599484024)
gi|18076790 (0/0.303445) TC406505 (−1.090831477) Purine metabolism, Galactose metabolism, Amino sugar and nucleotide sugar metabolism, Starch and sucrose metabolism, Pentose phosphate pathway, Biosynthesis of secondary metabolites (no map in kegg database), Glycolysis/Gluconeogenesis, Metabolic pathways (no map in kegg database)
gi|232033 (0/0.645651) TC376420 (−1.000125253)
gi|15808779 (0/0.381971) TC389590 (−1.052592673) Glutathione metabolism, Ascorbate and aldarate metabolism
gi|18146827 (0/0.479167) CK201148 (1.325723212) Amino sugar and nucleotide sugar metabolism
gi|2499932 (0/0.214757) CK155765 (−1.3639901) Purine metabolism, Metabolic pathways (no map in kegg database)
gi|9230743 (3.036805) TC370347 (1.175549678) Starch and sucrose metabolism, Metabolic pathways (no map in kegg database)
gi|8980491 (0/0.226741) TC396636 (−1.064190453)
gi|525291 (0.296689) TC411471 (−1.32428039) Oxidative phosphorylation, Metabolic pathways (no map in kegg database)
gi|11124572 (2.456281) CV767688 (−1.491369406) Inositol phosphate metabolism, Fructose and mannose metabolism, Biosynthesis of secondary metabolites (no map in kegg database), Glycolysis/Gluconeogenesis, Metabolic pathways (no map in kegg database), Carbon fixation in photosynthetic organisms
gi|27544804 (3.330519) CD908771 (1.284973401), CA729147 (2.336449618)