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. 2013 Nov 20;8(11):e79669. doi: 10.1371/journal.pone.0079669

Table 1. Input variables for epidemiologic and diagnostic parameters used in the base-case and sensitivity analyses.

Variable Base Value Range Reference
Epidemiologic Parameters
TB prevalence among patients evaluated for TB (%) 6.4 0.5–15 Clinical data
Proportion admitted during the daytime* (%) 24 10–50 Clinical data
No indication for admission except TB evaluation (%) 13 0–25 Clinical data
Number of annual inpatient TB evaluations 234 50–1000 Clinical data
Diagnostic Parameters
Sensitivity of Xpert (%)
Smear-positive specimens 98 97–99 [19]
Smear-negative specimens 68 59–75 [19]
Specificity of Xpert (%)
Smear-positive specimens 98 92–100 [19]
Smear-negative specimens 98 97–99 [19]
Sensitivity of smear microscopy (%) 78.5 65–92 [24]
Specificity of smear microscopy (%) 98 97–99 [24]

Definition of abbreviations: TB = tuberculosis.

Legend:

*

Admitted between 9 am–4 pm.

Microbiology laboratory database and patient chart review.

SFGH inpatient admission database.