Skip to main content
. Author manuscript; available in PMC: 2014 Nov 15.
Published in final edited form as: J Immunol. 2013 Oct 14;191(10):10.4049/jimmunol.1302079. doi: 10.4049/jimmunol.1302079

Table 1. siGENOME and Validation screen: prioritized Hit list.

Each gene is characterized by the average primary score (Whole Genome SMARTPool siRNA screen) and average score for each individual siRNA from the corresponding SmartPool. Validation index is indicating the number of “positive” out of 4 individual siRNAs, targeting each gene, which effectively reduced KIR2DL4-Ig binding in the validation screen.

Gene Symbol Accession
No.
Av.
Primary
Score
Av. Score
siRNA I
Av. Score
siRNA II
Av. Score
siRNA III
Av. Score
siRNA IV
Validation
Index
BSG NM_001728 0.61 0.70 1.14 0.98 0.89 1/4
CD63 NM_001780 0.69 0.75 1.06 1.01 0.91 1/4
CDH11 NM_001797 0.63 1.31 1.09 1.08 1.60 0/4
CDH3 NM_001793 0.67 1.15 1.29 1.40 2.02 0/4
CEACAM4 NM_001817 0.67 1.22 1.45 0.75 1.82 1/4
CEECAM1 NM_016174 0.61 1.18 1.14 0.64 0.89 1/4
CNTN5 NM_014361 0.59 1.02 0.89 1.00 1.12 0/4
DKFZP761O0113 NM_018409 0.42 1.13 1.08 0.98 0.90 0/4
FSTL3 NM_005860 0.52 1.03 1.21 0.74 1.19 1/4
HLA-A NM_002116 0.75 0.89 1.91 1.07 1.50 0/4
HLA-G NM_002127 0.68 0.73 1.03 1.02 1.02 1/4
HLA-E NM_005516 0.71 1.38 0.83 0.97 1.14 0/4
HS3ST3B1 NM_006041 0.51 0.79 0.72 0.96 0.46 3/4
KRTAP22-1 NM_181620 0.44 0.92 1.33 1.11 0.97 0/4
LIFR NM_002310 0.59 1.22 1.07 1.27 1.13 0/4
LOC347541 XM_293407 0.51 1.17 1.45 1.60 1.85 0/4
LRIG1 NM_015541 0.49 0.84 1.05 1.18 0.90 0/4
MICA NM_000247 0.68 1.22 0.83 1.53 2.08 0/4
MICB NM_005931 0.69 0.96 1.21 0.81 0.61 1/4
NAGLU NM_000263 0.54 1.06 1.46 1.73 1.83 0/4
PCDHA2 NM_018905 0.35 0.78 0.94 0.96 1.02 1/4
PVRL4 NM_030916 0.48 1.17 1.17 1.55 1.02 0/4
SGCA NM_000023 0.52 0.90 1.28 1.80 0.79 1/4
ULBP2 NM_025217 0.62 1.19 1.19 0.98 1.71 0/4