Skip to main content
. 2013 Nov 21;9(11):e1003372. doi: 10.1371/journal.pcbi.1003372

Table 2. Primer sets for the reverse transcription and real-time RT-qPCR.

Target Purpose Primer Name Sequence (5′-3′) Position (nt)
mRNA reverse transcription Oligo tagdTRT rev GTAAAACGACGGCCAGTTTTTTTTTTTTTTTTT polyA tail
real-time RT-qPCR Seg 5 Realtime for GGAAAGTGCAAGACCAGAAGAT 1388–1410
real-time RT-qPCR mRNA tagRealtime rev GTAAAACGACGGCCAGT tag sequence
cRNA reverse transcription Seg 5 tagRT rev GCTAGCTTCAGCTAGGCATCAGTAGAAACAAGGGTATTTTTCTT 1541–1565
real-time RT-qPCR Seg 5 Realtime for GGAAAGTGCAAGACCAGAAGAT 1388–1410
real-time RT-qPCR cRNA tagRealtime rev GCTAGCTTCAGCTAGGCATC tag sequence
vRNA reverse transcription Seg 5 tagRT for ATTTAGGTGACACTATAGAAGCGAGTGATTATGAGGGACGGTTGAT 192–215
real-time RT-qPCR Seg 5 Realtime rev CGCACTGGGATGTTCTTC 282–300
real-time RT-qPCR vRNA tagRealtime for ATTTAGGTGACACTATAGAAGCG tag sequence