. 2013 Nov 21;8(11):e79512. doi: 10.1371/journal.pone.0079512

Table 2. Mean ± 1 SD of fungal genera, expressed as percentage of sequences classified to phylum level in cured manure, hay, and hardwood compost recipes.

					n = 8	n = 7	n = 8
Phylum	Class	Order	Family	Genus	manure	hay	hardwood
Ascomycota ^ns					61.5±16.4	55.9±14.7	69.4±22.6
	Dothideomycetes^*	Pleosporales^*	Pleosporaceae^**	Epicoccum ^a ^**	0±0	2.1±1.5	0.3±0.8
	Eurotiomycetes^**	Eurotiales^**	Unknown^b ^, ^ns	Thermomyces ^ns	0±0	2.7±3.7	0±0
		Eurotiales^**	Trichocomaceae^**	Eurotium ^**	0±0	2.0±2.0	0±0
	Orbiliomycetes^*	Orbiliales^*	Orbiliaceae^*	Arthrobotrys ^c ^*	0.4±0.9	6.1±7.0	0±0
	Pezizomycetes^*	Pezizales^*	Ascobolaceae^*	Ascobolus ^*	9.3±12.3	2.4±3.7	0±0
		Unknown^*	Unknown^*	Unknown^*	3.2±3.1	1.1±1.3	0±0
	Sordariomycetes^*	Hypocreales^*	Unknown^**	Acremonium ^*	0±0	1.4±1.1	0±0
		Microascales^**	Microascaceae^**	Pseudallescheria ^ns	2.7±3.7	0.2±0.4	0±0
		Microascales^**	Microascaceae^**	Scedosporium ^d ^*	0.2±0.5	7.7±16.1	0±0
		Microascales^**	Microascaceae^**	Unknown^**	14.1±12.9	1.8±2.5	0±0
		Microascales^**	Unknown^**	Unknown^**	7.7±7.4	0.5±1.2	0±0
		Unknown^**	Unknown^**	Unknown^**	14.9±10.6	7.0±4.5	54.2±16.7
		Sordariales^*	Lasiosphaeriaceae^ns	Zopfiella ^ns	0.3±0.9	1.5±2.8	3.4±5.4
		Sordariales^*	Lasiosphaeriaceae^ns	Unknown^**	0±0	0±0	2.3±1.8
		Sordariales^*	Unknown^**	Unknown^**	0±0	0.2±0.4	2.8±2.6
	Unknown^ns	Unknown^ns	Unknown^ns	Unknown^ns	4.9±3.4	5.3±2.6	5.4±4.4
Basidiomycota ^ns					29.0±15.8	35.3±16.7	30.3±22.9
	Agaricomycetes^*	Agaricales^ns	Psathyrellaceae^ns	Coprinellus ^ns	0.3±0.9	0±0	6.6±9.6
		Agaricales^ns	Psathyrellaceae^ns	Coprinus ^ns	3.2±6.9	0±0	1.0±2.1
		Agaricales^ns	Psathyrellaceae^ns	Unknown^*	3.4±3.9	1.5±2.1	0±0
		Corticiales^ns	Corticiaceae^ns	Unknown^ns	0±0	1.3±1.4	2.5±3.7
		Unknown^**	Unknown^**	Myriococcum ^e ^**	0±0	9.8±9.7	0±0
		Unknown^ns	Unknown^ns	Unknown^ns	0.7±1.0	18.0±15.5	18.4±24.6
	Unknown^**	Unknown^**	Unknown^**	Unknown^**	16.8±11.0	0±0	0±0
	Unknown^*	Unknown^*	Unknown^*	Unknown^*	3.2±1.6	2.8±2.8	0.8±1.3
Chytridiomycota ^*					6.7±6.7	5.0±5.6	0±0
	Chytridiomycetes^*	Spizellomycetales^ns	Spizellomycetaceae^ns	Gaertneriomyces ^ns	0.3±0.8	1.6±4.2	0±0
		Unknown^*	Unknown^*	Unknown^*	4.8±6.6	3.4±3.3	0±0
Zygomycota ^*					2.9±2.2	3.8±3.2	0.3±0.8
	Incertae_sedis^*	Harpellales^*	Legeriomycetaceae^*	Smittium ^f ^*	1.3±1.5	0.3±0.6	0±0
		Mortierellales^ns	Mortierellaceae^ns	Mortierella ^ns	1.1±1.6	1.1±2.9	0±0
		Mucorales^ns	Mucoraceae^ns	Mucor ^ns	0±0	2.1±2.9	0±0

False Discovery Rate (FDR) p-values from Kruskal-Wallis test,

^n.s.

: p _FDR>0.05,

:0.01<p _FDR<0.05,

^**

: 0.001<p _FDR<0.01.

: rank order of Epicoccum species abundance: E. sp_CHTAM7, E. sp_TMS_2011.

represents a) a sequence from an undescribed taxon, b) from an environmental sequence were the organism was not identified, or c) a sequence matches a described species that is not represented in the reference database.

: rank order of Arthrobotrys species abundance: A. amerospora>A. flagrans>A. oligospora.

: rank order of Scedosporium species abundance: S. prolificans>S. aurantiacum>S. apiospermum.

: dominant species: Myriococcum thermophilum.

: rank order of Smittium species abundance: Smittium sp.>S. orthocladii.