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. 2013 Dec;81(12):4525–4533. doi: 10.1128/IAI.00599-13

Table 2.

Cloning and PCR primers used in this study

Primer Sequence (5′→3′)a Use (bp location)b
Ssa.dsd1seq/BamHI CACGGATCCGAAATTGCTGAAGATGCG Cloning
Ssa.dsd1rev/HindIII GTGAAGCTTTGTACGATGATCGTAAGG Cloning
Ssa.dsd2seq/PstI CAGCTGCAGTTTACTTTAGTTCGGTAGAG Cloning
Ssa.dsd2/2rev/XbaI GTGTCTAGAGTTCCTGACTCTTTGTGG Cloning
Ssa.dsd4rev/HindIII GCGAAGCTTCTATAAGCAAGATTTACC Cloning
Ssa.dsd4seq/BamHI GTAGGATCCAACGATTTAGCAACACTT Cloning
Ssa.dsd10rev TCACCTCGCTATATCTGG PCR
Ssa.dsd10seq TTTCTTCCACTGACGTGC PCR
catseq GTTACAGTAATATTGACT PCR, DIG probe synthesis (183–201)
catrev CATAAACAATCCTGCATG PCR, DIG probe synthesis (872–890)
ermB TCTAGAACTAGTGGATCCC PCR, DIG probe synthesis
ermB TATTGTCTGCAGccgagagtgattggtctt PCR, DIG probe synthesis
CAT473seq CAGCAAACTACGTATAGC PCR, DIG probe synthesis
CAT473rev CAAGGAATCATTGAAATCG PCR, DIG probe synthesis
pPS44rev/SstI ATAGAGCTGGTGACCACTTGTGATAACG PCR, cloning
pPS44seq/XbaI TGCTCTAGAACTCGTGTGCATAATTCACGC PCR, cloning
a

Restriction sites in the 5′ extensions of primers are underlined. Lowercase letters indicate nonhomologous sequences with added restriction sites.

b

DIG, digoxigenin.