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. 2013 Dec;87(23):12850–12865. doi: 10.1128/JVI.01862-13

Fig 4.

Fig 4

Phylogenetic relationships of HEBV, TAIV, and KIBV to representative members of the family Bunyaviridae. Phylogenies were investigated for the RdRp, Gn, Gc, and N proteins based on sizes of 364 aa, 140 aa, 622 aa, and 587 aa, respectively. Maximum likelihood (ML) analyses were performed on a gap-free alignment guided by the BLOSUM62 substitution matrix and using MAFFT (E-INS-I algorithm). Confidence testing was performed by 1,000 bootstrap replicates. Bars indicate evolutionary substitutions per position in the alignments. Smaller pictograms represent ML analyses of HEBV, TAIV, KIBV, all available orthobunyavirus, and tospovirus sequences based on sizes of 3,228 aa, 485 aa, 520 aa, and 331 aa for the RdRp, Gn, Gc, and N proteins, respectively. Abbreviations (and GenBank accession numbers for L, M, and S segments, respectively, in parentheses) are as follows: AGUV, Aguacate virus (accession numbers NC_015451, NC_015450, and NC_015452); AINOV, Aino virus (accession numbers NC_018465, NC_018459, and NC_018460); AKAV, Akabane virus (accession numbers NC_009894, NC_009895, and NC_009896); AMBV, Anhembi virus (accession numbers JN572062, JN572063, and JN572064); ANDV, Andes virus (accession numbers NC_003468, NC_003467, and NC_003466); BeNMV, bean necrotic mosaic virus (accession numbers NC_018070, NC_018072, and NC_018071); BUNV, Bunyamwera virus (accession numbers NC_001925, NC_001926, and NC_001927); CACV, Capsicum chlorosis virus (accession numbers NC_008302, NC_008303, and NC_008301); CDUV, Candiru virus (accession numbers NC_015374, NC_015373, and NC_015375); DOBV, Dobrava virus (accession numbers NC_005235, NC_005234, and NC_005233); GBNV, groundnut bud necrosis virus (accession numbers NC_003614, NC_003620, and NC_003619); GOLV, Gouléako virus (accession numbers HQ541738, HQ541737, and HQ541736); GRSV-TCSV, groundnut ringspot and tomato chlorotic spot virus reassortant (accession numbers NC_015469, NC_015468, and NC_015467); HEBV, Herbert virus (accession numbers JQ659256, JQ659257, and JQ659258); HTNV, Hantaan virus (accession numbers NC_005222, NC_005219, and NC_005218); HVZ10, Hantavirus Z10 virus (accession numbers NC_006435, NC_006437, and NC_006433); INSV, Impatiens necrotic spot virus (accession numbers NC_003625, NC_003616, and NC_003624); KIBV, Kibale virus (accession numbers KF590577, KF590576, and KF590575); LACV, La Crosse virus (accession numbers NC_004108, NC_004109, and NC_004110); LEAV, Leanyer virus (accession numbers HM627178, HM627176, and HM627177); MCAV, Macaua virus (accession numbers JN572068, JN572069, and JN572070); MYSV, melon yellow spot virus (accession numbers NC_008306, NC_008307, and NC_008300); OROV, Oropouche virus (accession numbers NC_005776, NC_005775, and NC_005777); PUUV, Puumala virus (accession numbers NC_005225, NC_005223, and NC_005224); RVFV, Rift Valley fever virus (accession numbers NC_014397, NC_014396, and NC_014395); SATV, Sathuperi virus (accession numbers NC_018461, NC_018466, and NC_018462); SBV, Schmallenberg virus (accession numbers JX853179, JX853180, and JX853181); SEOV, Seoul virus (accession numbers NC_005238, NC_005237, and NC_005236); SFSV, sandfly fever Sicilian virus (accession numbers NC_015412, NC_015411, and NC_015413); SFTSV, severe fever with thrombocytopenia syndrome virus (accession numbers NC_018136, NC_018138, and NC_018137); SHAV, Shamonda virus (accession numbers NC_018463, NC_018467, and NC_018464); SIMV, Simbuvirus (accession numbers NC_018476, NC_018478, and NC_018477); SNV, Sin Nombre virus (accession numbers NC_005217, NC_005215, and NC_005216); SORV, Sororoca virus (accession numbers JN572071, JN572072, and JN572073); TAIV, Taï virus (accession numbers KF590574, KF590573, and KF590572); TOSV, Toscana virus (accession numbers X68414, X89628, and X53794); TPMV, Thottapalayam virus (accession numbers NC_010707, NC_010708, and NC_010704); TSWV, tomato spotted wilt virus (accession numbers NC_002052, NC_002050, and NC_002051); TULV, Tula virus (accession numbers NC_005226, NC_005228, and NC_005227); TZSV, tomato zonate spot virus (accession numbers NC_010491, NC_010490, and NC_010489); UUKV, Uukuniemi virus (accession numbers NC_005214, NC_005220, and NC_005221); WSMOV, watermelon silver mottle virus (accession numbers NC_003832, NC_003841, and NC_003843); WYOV, Wyeomyia virus (accession numbers JN572080, JN572081, and JN572082).