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Phylogenetic trees of viruses from 4 animals, representing the different levels of diversity observed within animals. Triangles correspond to sequences from buccal swab samples and circles to sequences from blood samples. Animals MBG61 (A), and MBG226 (B), and MBG214 (C) each had a single strain (charmaguria, dhamrai, and bormi1, respectively) in the two compartments. In animal MBG247 (D), dokhola is observed in blood samples and dhamrai in buccal swab samples.
