Table 1. Details of the avian influenza A (H9N2) virus strains isolated from environment specimens in Zhejiang province, China in 2013.
rRT-PCR (Ct value)
|
|||||||
---|---|---|---|---|---|---|---|
No. | Strain name | Source location | Specimens | H7 | H9 | GenBank accession No. | |
1 | A/environment/Zhejiang/09/2013 | Hangzhou | Chicken manure | 35 | 14 | KF178662-KF178669 | |
2 | A/environment/Zhejiang/13/2013 | Hangzhou | Swab of chicken cage | 29 | 10 | KF178670-KF178677 | |
3 | A/environment/Zhejiang/14/2013 | Huzhou | Swab of chicken cage | 17 | 10 | KF178678-KF178685 | |
4 | A/environment/Zhejiang/15/2013 | Huzhou | Sewage of poultry market | 22 | 11 | KF178686-KF178693 | |
5 | A/environment/Zhejiang/16/2013 | Huzhou | Chicken manure | 29 | 11 | KF178694-KF178701 |
rRT-PCR is the abbreviation of real-time reverse-transcriptase polymerase chain reaction
H7and H9 means the influenza virus subtype H7 and H9.
GenBank accession numbers of each strain contain eight numbers for the HA, NA, PA, NP, M, NS, PB1 and PB2 genes.