Table 3. Pearson correlation between fresh frozen and FFPE RNA pairs using nanoString and ScriptSeq protocols.
NanoString FROZ vs FFPE | ScriptSeq FROZ vs FFPE | |
---|---|---|
BRB123 | 0.926 (0.950) | 0.790 (0.943) |
BRB144 | 0.955 (0.965) | 0.807 (0.957) |
BRB147 | 0.728 (0.917) | 0.802 (0.945) |
BRB157 | 0.807 (0.930) | 0.793 (0.932) |
BRB212 | 0.972 (0.962) | 0.830 (0.963) |
BRB215 | 0.818 (0.976) | 0.598 (0.961) |
BRB248 | 0.942 (0.976) | 0.830 (0.972) |
BRB277 | 0.973 (0.970) | 0.825 (0.971) |
MCJBCR028 | 0.747 (0.941) | 0.773 (0.933) |
mean | 0.874 (0.954) | 0.783 (0.953) |
Spearman correlation in parentheses