Table 4. Pearson cross-platform correlation.
NanoString FFPE vs ScriptSeq FFPE | NanoString FROZ vs ScriptSeq FROZ | NanoString FROZ vs TruSeq FROZ | ScriptSeq FROZ vs TruSeq FROZ | |
---|---|---|---|---|
BRB123 | 0.921 (0.771) | 0.721 (0.740) | 0.881 (0.829) | 0.702 (0.931) |
BRB144 | 0.924 (0.707) | 0.746 (0.707) | 0.710 (0.779) | 0.579 (0.920) |
BRB147 | 0.468 (0.727) | 0.372 (0.734) | 0.780 (0.822) | 0.66 (0.920) |
BRB157 | 0.869 (0.751) | 0.805 (0.728) | 0.880 (0.820) | 0.682 (0.915) |
BRB212 | 0.919 (0.711) | 0.664 (0.714) | 0.903 (0.811) | 0.651 (0.929) |
BRB215 | 0.744 (0.767) | 0.634 (0.762) | 0.610 (0.830) | 0.8212 (0.942) |
BRB248 | 0.889 (0.721) | 0.679 (0.724) | 0.922 (0.800) | 0.686 (0.926) |
BRB277 | 0.887 (0.717) | 0.827 (0.730) | 0.870 (0.794) | 0.655 (0.934) |
MCJBCR028 | 0.923 (0.731) | 0.525 (0.743) | 0.558 (0.801) | 0.686 (0.942) |
mean | 0.838 (0.734) | 0.664 (0.731) | 0.790 (0.809) | 0.680 (0.929) |
Spearman correlation in parentheses