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. 2013 Nov 22;8(11):e82481. doi: 10.1371/journal.pone.0082481

Table 1. Physicochemical properties of selected compounds.

Drug Class Drug SMILES ClogP Basic pKa
Antimalarial Chloroquine CCN(CC)CCCC(C)NC1=C2C=CC(Cl)=CC2=NC=C1 5.06 10.47
Antipsychotic Chlorpromazine CN(C)CCCN1C2=CC=CC=C2SC2=C1C=C(Cl)C=C2 5.3 9.41
Thioridazine CSC1=CC2=C(SC3=CC=CC=C3N2CCC2CCCCN2C)C=C1 6 9.64
Tricyclic Antidepressants Desipramine CNCCCN1C2=CC=CC=C2CCC2=CC=CC=C12 4.47 10.4
Imipramine CN(C)CCCN1C2=CC=CC=C2CCC2=CC=CC=C12 5.04 9.49
Nortriptyline CNCCC=C1C2=CC=CC=C2CCC2=CC=CC=C12 4.32 10
Clomipramine CN(C)CCCN1C2=CC=CC=C2CCC2=C1C=C(Cl)C=C2 5.92 9.46
Serotonin Selective Re-uptake inhibitors (Antidepressants) Sertraline CN[C@H]1CC[C@@H](C2=CC(Cl)=C(Cl)C=C2)C2=CC=CC=C12 5.35 9.47
Paroxetine FC1=CC=C(C=C1)[C@@H]1CCNC[C@H]1COC1=CC2=C(OCO2)C=C1 4.24 10.32
Fluoxetine CNCCC(OC1=CC=C(C=C1)C(F)(F)F)C1=CC=CC=C1 4.57 10.06
Antihistamine Astemizole COC1=CC=C(CCN2CCC(CC2)NC2=NC3=CC=CC=C3N2CC2=CC=C(F)C=C2)C=C1 5.84 9.03

Note: The clogP and basic pKa values were calculated using ACD/Labs software (www.acdlabs.com).