Table 2.
Drug effects on gene expression and editing in astrocytes are identical in freshly isolated cells from treated animals and primary cultures of astrocytes, but the expression is often not recognized by the microarray analyses, indicatest as + or −.
Protein | Gene | Drug | FACS | Culture | Microarray |
|||
---|---|---|---|---|---|---|---|---|
(4) | (6) | (10) | [4*] | |||||
5-HT2B receptor expression | Htr2b | Fluox | Up | Up | − | − | − | |
5-HT2B editing | Htr2b | Fluox | Up | Up | ||||
5-HT2c receptor expression | Htr2c | Fluox | Unchanged | Unchanged | − | − | − | |
cPLA2a | Pla2g4a | Fluox | Up | Up | − | − | − | + |
sPLA2 | Pla2g2a | Fluox | Unaltered | Unaltered | − | − | − | |
ADAR2 | Adarb1 | Fluox | Up | Up | − | − | − | − |
GluK2 expression | Grik2 | Fluox | Up | Up | + | + | − | − |
GluK2 editing | Grik2 | Fluox | Up | Up | ||||
GluK4 expression | Grik4 | Fluox | Unchanged | Unchanged | − | − | − | − |
cfos expression | cFos | Fluox | Up | Up | − | + | − | + |
fosB expression | Fosb | Fluox | Up | Up | − | + | − | + |
NBCe1 | Slc4a4 | Cbz | Up | Up | + | + | + | + |
GluK2 | Grik2 | Cbz | Down | Down | ||||
cPLA2 | Pla2g4a | Cbz | Up | Up |
The Table shows all experiments in which we have compared drug [fluoxetine (Fluox) or carbamazepine (Cbz)] effects in cultured astrocytes and in astrocytes obtained by FACS. Complete agreement was found between these two preparations, but the correlation was poor with expression of the same genes obtained using microarray analysis and with the cultures, different from ours, studied by Cahoy et al. using microanalysis (4*). The FACS and culture data are from (47) and (48). Microarray data show only gene expression and are from Lovatt et al. [4], Cahoy et al. [6] and Doyle et al. [10] Cahoy et al. (6) also presented data for cultures different from ours, shown under [4]. As in Table 1, expression is shown as either present (+) or absent (−) based on the number values in the microarray analysis itself [2 and 4] or fold-enrichment and significance [1] and [3] shown by Lovatt and Nedergaard (9).