Table 1.
Dual late activities of intermediate promoters
VACV WR |
VACV COP |
Relativea luminescence | Functional categoriesb |
---|---|---|---|
33 | K2L | 22,623 | Host interaction; EV and WV membrane proteins |
35 | K4L | 21,103 | DNA replication, core-associated enzymes and transcriptional factors |
52 | F13L | 556,924 | EV and WV membrane proteins |
62 | E6R | 10,679 | Required for morphogenesis |
63 | E7R | 0 | Unknown |
64 | E8R | 826 | Core-associated non-enzymatic proteins |
67 | E11L | 74,499 | Core-associated non-enzymatic proteins |
69 | O2L | 249,648 | Core-associated enzymes and transcriptional factors |
69.5 | O3L | 55,201 | MV membrane-associated proteins; EFC |
70 | I1L | 54,568 | Core-associated non-enzymatic proteins; required for morphogenesis; DNA-binding and packing proteins |
74 | I5L | 151,740 | MV membrane-associated proteins |
75 | I6L | 33,651 | Core-associated non-enzymatic proteins; required for morphogenesis; DNA-binding or packaging proteins |
77 | I8R | 25,296 | Core-associated enzymes and transcriptional factors; transcription |
81 | G4L | 210,652 | MV membrane-associated proteins; S-S bond formation pathway; required for morphogenesis |
86 | G8R | 20,235 | Transcription, late stage |
91 | L4R | 174,828 | Core-associated non-enzymatic proteins; DNA-binding proteins; transcription |
93 | J1R | 61,879 | Core-associated non-enzymatic proteins |
99 | H1L | 79,812 | Core-associated enzymes and transcriptional factors; transcription |
101 | H3L | 120,648 | MV membrane-associated proteins |
105 | H7R | 19,760 | Contributes to the formation of crescent membrane |
111 | D6R | 74,841 | Core-associated enzymes and transcriptional factors; DNA-binding and packing proteins; transcription |
113 | D8L | 388 | MV membrane-associated proteins |
115 | D10R | 9,701 | Host interaction |
116 | D11L | 45,394 | Core-associated enzymes and transcriptional factors; Transcription |
118 | D13L | 160,625 | Required for morphogenesis; required for crescent formation |
119 | A1L | 4,072 | Transcription, late stage |
120 | A2L | 5,502 | Transcription, late stage |
122 | A3L | 372,152 | Core-associated non-enzymatic proteins; required for morphogenesis |
125 | A6L | 54,180 | Core-associated non-enzymatic proteins; required for morphogenesis |
131 | A12L | 343,579 | Core-associated non-enzymatic proteins |
135 | A15L | 113,953 | Core-associated non-enzymatic proteins; required for morphogenesis |
136 | A16L | 8,392 | MV membrane-associated proteins; EFC |
139 | A19L | 593,009 | Unknown |
142 | A22R | 67,366 | DNA replication; DNA-binding or packing proteins |
146 | no ortholog | 932 | Pseudogene |
147 | no ortholog | 0 | Pseudogene |
148 | A25L | 721,492 | MV membrane-associated proteins; truncated |
150 | A27L | 198,933 | MV membrane-associated proteins |
153 | A30L | 212,505 | Core-associated non-enzymatic proteins; required for morphogenesis |
153.5 | A30.5L | 0 | Unknown |
155 | A32L | 62,632 | Core-associated enzymes and transcriptional factors; DNA-binding or packaging proteins |
157 | A34R | 676,586 | EV and WV membrane proteins |
162 | A38L | 17,456 | CD47-like putative membrane protein |
164 | no ortholog | 0 | Pseudogene |
167 | A42R | 577,110 | Unknown |
168 | A43R | 26 | Host interaction |
179 | A53R | 506 | Host interaction |
186 | B4R | 21,721 | Unknown |
191 | B9R | 10,233 | Unknown |
192 | B10R | 0 | Unknown |
197 | WR-B15R | 134 | Host interaction |
206 | C13L | 2,878 | Unknown |
204.5 | no ortholog | 112,865 | Unknown |
Relative to activity (1,000,000 fluorescent units) of F17 late promoter
EFC, Entry-Fusion Complex; EV, enveloped virion; WV, wrapped virion