Table 2.
Median evolutionary distances to the outgroup species Sorghum bicolor and Zea mays as estimated by the general time reversible (GTR) model, and synonymous (dS) and nonsynonymous (dN) substitutions per synonymous/nonsynonymous site
Trees | Method | Rice | Pooideae | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Bd | Hv | Ta | Fp | Lp | ||||||
All | GTR | 0.220 | 0.230 | 0.250 | 0.253 | 0.262 | 0.253 | |||
dS | 0.638 | 0.619 | 0.661 | 0.665 | 0.657 | 0.672 | ||||
dN | 0.071 | 0.077 | 0.083 | 0.082 | 0.091 | 0.083 | ||||
Low temperature induced | GTR | 0.206 | 0.224 | 0.244 | 0.246 | 0.267 | 0.252 | |||
dS | 0.641 | 0.624 | 0.657 | 0.669 | 0.667 | 0.686 | ||||
dN | 0.063 | 0.070 | 0.077 | 0.075 | 0.080 | 0.077 |
Bd, Brachypodium distachyon; Hv, Hordeum vulgare (barley); Ta, Triticum aestivum (wheat); Fp, Festuca pratensis; Lp, Lolium perenne.