Table 2. Comparisons of total protein groups or protein groups predicted with one or more TM helix identified from normal rat liver plasma membrane (LIPM) and hepatocellular carcinoma Morris hepatoma plasma membrane (MHPM) using different treatments.

Data shown here was acquired by an Orbitrap Velos mass spectrometer as described in Table 1.

Samples	Total Protein Groups	Protein Groups with TMD>=1
Common(LIPDvsLISW)	263	151
LIPD_Unique	171	115
LISW_Unique	704	190
Common(MHPDvsMHSW)	264	142
MHPD_Unique	213	134
MHSW_Unique	688	164
Common(LIPDvsMHPD)	392	245
LIPD_Unique	42	21
MHPD_Unique	85	31
Common(LISWvsMHSW)	760	261
LISW_Unique	207	80
MHSW_Unique	192	45