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. 2013 Nov 26;8(11):e81469. doi: 10.1371/journal.pone.0081469

Table 3. RSCU values of codons in TTSuV2, TTSuV1 and swine.a .

AA b Codon RSCU TTSuV1 SUS c AA b Codon RSCU TTSuV1 SUS c
Phe UUU 1.00 0.76 1.11 Tyr UAU 1.10 1.10 1.12
UUC 1.00 1.24 0.89 UAC 0.90 0.90 0.82
Leu UUA 1.56 1.38 0.65 Ala GCU 0.81 1.20 1.36
UUG 0.85 1.21 0.85 GCC 0.94 1.15 1.22
CUU 0.90 0.49 1.20 GCA 1.51 1.15 1.05
CUC 1.03 0.71 1.12 GCG 0.74 0.50 0.37
CUA 1.23 0.99 0.56 His CAU 0.91 0.60 0.97
CUG 0.44 1.22 1.62 CAC 1.09 1.40 1.03
Ile AUU 0.53 0.57 1.06 Gln CAA 1.01 0.90 0.85
AUC 0.95 1.02 1.11 CAG 0.99 1.10 1.15
AUA 1.51 1.41 0.83 Asn AAU 0.97 1.01 1.02
Val GUU 0.71 0.62 1.11 AAC 1.03 0.99 0.98
GUC 0.56 0.40 0.96 Lys AAA 1.26 1.22 1.21
GUA 1.74 1.28 0.64 AAG 0.74 0.78 0.79
GUG 0.99 1.71 1.29 Asp GAU 0.67 0.74 0.95
Ser UCU 0.82 0.75 1.34 GAC 1.33 1.26 1.05
UCC 1.35 0.72 1.20 Glu GAA 1.26 1.08 1.09
UCA 1.65 1.49 1.00 GAG 0.74 0.92 0.91
UCG 0.53 0.56 0.31 Cys UGU 0.67 0.55 1.06
AGU 0.55 1.39 0.93 UGC 1.33 1.45 0.94
AGC 1.10 1.10 1.22 Arg CGU 0.58 0.51 0.55
Pro CCU 1.58 1.21 1.26 CGC 0.39 0.93 0.65
CCC 0.25 0.72 1.08 CGA 0.50 0.63 0.54
CCA 1.48 1.11 1.23 CGG 0.64 0.55 0.74
CCG 0.69 0.96 0.43 AGA 2.16 1.34 1.86
Thr ACU 1.31 1.01 1.19 AGG 1.73 2.05 1.67
ACC 1.01 1.23 1.23 Gly GGU 0.49 0.74 0.81
ACA 1.06 1.21 1.24 GGC 0.66 0.99 1.08
ACG 0.63 0.55 0.34 GGA 2.07 1.31 1.18
GGG 0.78 0.95 0.94
a

The preferred codons for each amino acid is displayed in bold.

b

AA is the abbreviation of Amino Acid.

c

SUS is swine.