Table 2.
Canonical human splice sequence | Intron |
Acceptor |
Donor |
Intron |
||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
−13 | −12 | −11 | −10 | −9 | −8 | −7 | −6 | −5 | −4 | −3 | −2 | −1 | 1 | 2 | 2 | 1 | +1 | +2 | +3 | +4 | +5 | |
T | T | T | T | T | T | T | T | T | T | C | A | G | G | T | A | G | G | T | A | A | G | |
50.5% | 52.2% | 55.4% | 52.4% | 49.3% | 46.4% | 46.0% | 50.9% | 55.5% | 28.1% | 65.0% | 100.0% | 100.0% | 49.0% | 36.9% | 63.9% | 80.6% | 100.0% | 100.0% | 60.5% | 69.9% | 78.3% | |
V1 chr1:94,483, 997–94,484,011 | C | T | G | T | C | T | A | C | A | C | G 0.2% A 5.6% |
A | G | G | A | |||||||
V2 chr1:94,483, 921–94,483,927 | A | G | G | T | A | C 7.3% A 69.9% |
C | |||||||||||||||
V3 chr1:94,484, 077–94,484,083 | T | A 9.8% G 80.6% |
G | T | A | A | G | |||||||||||||||
V4 chr1:94,493, 000–94,493,014 | T | G | T | C | A | A | T | G | C | T | G | A | G | G | G 19.9% A 24.4% |
|||||||
V5 chr1:94,492, 959–94,492,973 | C 28.0% T 50.5% |
C | T | C | C | A | G | C | A | T | C | A | G | G | A | |||||||
V6 chr1:94,466, 600–94,466,606 | T | C | G | T | G 34.1% A 60.5% |
A | G | |||||||||||||||
V7 chr1:94,487, 397–94,487,403 | G | G | G | T | A 60.5% G 34.1% |
T | G |