Table 1. Nucleotide sequences of primers and amplicon size used for qRT-PCR.
Gene | Forward primer (5' to 3') | Reverse primer (5' to 3') | Amplicon (bp) |
---|---|---|---|
18S | CGCGGTTCTATTTTGTTGGT | AGTCGGCATCGTTTATGGTC | 219 |
β-actin | TACAGCTTCACCACCACAGC | TCTCCAGGGAGGAAGAGGAT | 120 |
AgRP | AGAGTTCTCAGGTCTAAGTCT | CTTGAAGAAGCGGCAGTAGCACGT | 210 |
CART | AGAAGAAGTACGGCCAAGTCC | CACACAGCTTCCCGATCC | 84 |
GDI | CCGCACAAGGCAAATACATC | GACTCTCTGAACCGTCATCAA | 210 |
Leptin | TTCACACACGCAGTCGGTAT | AGGTCTCGCAGGTTCTCCAG | 186 |
NPY | TGGACTGACCCTCGCTCTAT | GTGTCTCAGGGCTGGATCTC | 188 |
ObRb | AGCCAAACAAAAGCACCATT | TCCTGAGCCATCCAGTCTCT | 174 |
POMC | CCTGTGAAGGTGTACCCCAATGTC | CACGTTCTTGATGATGGCGTTC | 266 |
SOCS-3 | ACTGAGCCGACCTCTCTCCT | CCCCTCTGACCCTTTCTTTG | 172 |
Abbreviations: AgRP, Agouti-related peptide; CART, cocaine- and amphetamine-regulated transcript; GDI, rho gdp dissociation inhibitor alpha; NPY, neuropeptide Y; ObRb, long-form leptin receptor; POMC, proopiomelanocortin; SOCS-3, suppressor of cytokine signalling-3. Thermal cycling conditions for all genes, with the exception of leptin were as follows: 10 min at 95°C followed by a total of 40 two-temperature cycles (15 s at 95°C and 1 min at 60°C). For leptin, conditions were as follows: 7 min at 95°C followed by a total of 50 three-temperature cycles (15 s at 95°C, 20 s at 60°C and 40 s at 72°C).