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. 2013 Nov 28;8(11):e81906. doi: 10.1371/journal.pone.0081906

Table 1. Nucleotide sequences of primers and amplicon size used for qRT-PCR.

Gene Forward primer (5' to 3') Reverse primer (5' to 3') Amplicon (bp)
18S CGCGGTTCTATTTTGTTGGT AGTCGGCATCGTTTATGGTC 219
β-actin TACAGCTTCACCACCACAGC TCTCCAGGGAGGAAGAGGAT 120
AgRP AGAGTTCTCAGGTCTAAGTCT CTTGAAGAAGCGGCAGTAGCACGT 210
CART AGAAGAAGTACGGCCAAGTCC CACACAGCTTCCCGATCC 84
GDI CCGCACAAGGCAAATACATC GACTCTCTGAACCGTCATCAA 210
Leptin TTCACACACGCAGTCGGTAT AGGTCTCGCAGGTTCTCCAG 186
NPY TGGACTGACCCTCGCTCTAT GTGTCTCAGGGCTGGATCTC 188
ObRb AGCCAAACAAAAGCACCATT TCCTGAGCCATCCAGTCTCT 174
POMC CCTGTGAAGGTGTACCCCAATGTC CACGTTCTTGATGATGGCGTTC 266
SOCS-3 ACTGAGCCGACCTCTCTCCT CCCCTCTGACCCTTTCTTTG 172

Abbreviations: AgRP, Agouti-related peptide; CART, cocaine- and amphetamine-regulated transcript; GDI, rho gdp dissociation inhibitor alpha; NPY, neuropeptide Y; ObRb, long-form leptin receptor; POMC, proopiomelanocortin; SOCS-3, suppressor of cytokine signalling-3. Thermal cycling conditions for all genes, with the exception of leptin were as follows: 10 min at 95°C followed by a total of 40 two-temperature cycles (15 s at 95°C and 1 min at 60°C). For leptin, conditions were as follows: 7 min at 95°C followed by a total of 50 three-temperature cycles (15 s at 95°C, 20 s at 60°C and 40 s at 72°C).