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. 2013 Nov 15;6(12):2968–2974.

Table 1.

Details of SNPs and primers used in this study

rank SNP pHWE* MAF# Wild type allele location Forward primer Reverse primer Genotype ratio
1 rs594631 0.711 0.476 A A/T intron ACGTTGGATGGGATTTTTGTTAGCTAGTG ACGTTGGATGACCAGACAAGCACACAACA 96.08%
2 rs970318 0.901 0.233 A A/G intron ACGTTGGATGAGCCTATCTCACAAGAGGGA ACGTTGGATGCTATTTGCGATAATAATGCTG 95.56%
3 rs2642186 0.987 0.439 G C/G intron ACGTTGGATGCTCTAGGTCAAAAGTCGTGG ACGTTGGATGTCCAATTCATTTCCACCCCC 96.61%
4 rs2792975 0.995 0.578 C C/G intron ACGTTGGATGAATCAACAGGGTGAAGAGAC ACGTTGGATGGGATATTAGTCCCCTGTTGC 92.43%
5 rs6696125 0.974 0.244 T C/T intron ACGTTGGATGCAAATATTTCCTTCTAGTC ACGTTGGATGACGATAAATTGGACTTCAC 93.21%
6 rs12039822 1.000 0.293 C C/T intron ACGTTGGATGGCTGTAATTAGCCTCAGTGG ACGTTGGATGAAAGCCTCACCACAGGCTAC 97.65%
7 rs12132032 0.160 0.167 A A/G intron ACGTTGGATGAGAGGTAACTGAGGCATAG ACGTTGGATGCTCTAGAGTCACTGTTTGGG 95.56%
*

p-value for deviation from Hardy-Weinberg equilibrium.

#

Minor allele frequency in Han Chinese.