Table 1.
rank | SNP | pHWE* | MAF# | Wild type | allele | location | Forward primer | Reverse primer | Genotype ratio |
---|---|---|---|---|---|---|---|---|---|
1 | rs594631 | 0.711 | 0.476 | A | A/T | intron | ACGTTGGATGGGATTTTTGTTAGCTAGTG | ACGTTGGATGACCAGACAAGCACACAACA | 96.08% |
2 | rs970318 | 0.901 | 0.233 | A | A/G | intron | ACGTTGGATGAGCCTATCTCACAAGAGGGA | ACGTTGGATGCTATTTGCGATAATAATGCTG | 95.56% |
3 | rs2642186 | 0.987 | 0.439 | G | C/G | intron | ACGTTGGATGCTCTAGGTCAAAAGTCGTGG | ACGTTGGATGTCCAATTCATTTCCACCCCC | 96.61% |
4 | rs2792975 | 0.995 | 0.578 | C | C/G | intron | ACGTTGGATGAATCAACAGGGTGAAGAGAC | ACGTTGGATGGGATATTAGTCCCCTGTTGC | 92.43% |
5 | rs6696125 | 0.974 | 0.244 | T | C/T | intron | ACGTTGGATGCAAATATTTCCTTCTAGTC | ACGTTGGATGACGATAAATTGGACTTCAC | 93.21% |
6 | rs12039822 | 1.000 | 0.293 | C | C/T | intron | ACGTTGGATGGCTGTAATTAGCCTCAGTGG | ACGTTGGATGAAAGCCTCACCACAGGCTAC | 97.65% |
7 | rs12132032 | 0.160 | 0.167 | A | A/G | intron | ACGTTGGATGAGAGGTAACTGAGGCATAG | ACGTTGGATGCTCTAGAGTCACTGTTTGGG | 95.56% |
p-value for deviation from Hardy-Weinberg equilibrium.
Minor allele frequency in Han Chinese.