Table II.
RMSD of C-Terminal Core Domains Within and Between a MAPK Families
| MAPK | C-terminal core | Moving PDB | RMSD (Å2) | MAPK residues | ERK2 (3TEI) residues | RMSD (Å2) |
|---|---|---|---|---|---|---|
| ERK2 (3TEI) | 108–173 | 2FYSa | 1.04 | |||
| 190–201 | 2GPHa | 0.60 | ||||
| 207–254 | 3O71a | 0.59 | ||||
| 258–326 | 2Y9Q | 0.96 | ||||
| 4FMQ | 1.04 | |||||
| 4H3Q | 0.57 | |||||
| 4H3P | 0.58 | |||||
| 4IZ5 | 0.60 | |||||
| p38 (2Y80) | 109–117 | 1LEW | 0.30 | 109–113 | 108–112 | |
| 123–171 | 1LEZ | 0.40 | 123–169 | 122–168 | 0.65 | |
| 185–321 | 2OKR | 0.31 | 298–315 | 303–320 | ||
| 3P4K | 0.38 | |||||
| 4KA3 | 0.40 | |||||
| 3TGI | 1.10 | |||||
| JNK1 (2XRW) | 111–170 | 1UKH | 0.51 | 111–115 | 108–112 | |
| 199–250 | 2XS0 | 0.52 | 125–170 | 123–168 | 1.12 | |
| 267–281 | 311–328 | 303–320 | ||||
| 288–334 | ||||||
| JNK3 (4H39) | 149–207 | 4H3B | 0.48 | 149–153 | 108–112 | |
| 222–319 | 4H36 | 0.55 | 163–208 | 123–168 | 1.02 | |
| 326–371 | 349–366 | 303–320 | ||||
| FUS3 (2B9H) | 96–163 | 2B9I | 0.37 | 98–100 | 110–112 | |
| 180–319 | 2B9J | 0.24 | 111–156 | 123–168 | 0.46 | |
| 299–316 | 303–320 | |||||
| ERK5 (4IC7) | 140–143 | n/ab | n/ab | 140–143 | 108–111 | |
| 156–199 | 156–199 | 123–166 | 0.54 | |||
| 319–346 | 319–346 | 285–312 |
Mouse/rat ERK2 isoform; C-terminal core residues corresponding to the human isoform are 106–171, 188–199, 205–252, 256–324.
Only 1 ERK5 complex available.