Table 2.
Transcription factor genes showing a transcript level fold-change ≥ ; 2 between consecutive stages of embryo development
| Cl | Gene ID | Pp unigene | At Locus | E-value | Annotation | Up-regulated | FC | Down regulated | FC |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
6.3.22.5 |
20408 |
AT4G38620 |
7E-72 |
R2R3 MYB protein 4 (MYB4) |
D0 → D5 |
2.7 |
- |
- |
| D5 → D11 |
2.4 |
|
|
||||||
| 1 |
12.1.13.17 |
7865 |
AT3G54390 |
2E-45 |
Sequence-specific DNA binding protein |
D0 → D5 |
2.2 |
- |
- |
| 1 |
6.4.7.23 |
1862 |
AT1G68920 |
8E-56 |
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
D0 → D5 |
2.1 |
- |
- |
| 6 |
8.2.2.4 |
1030 |
AT1G32240 |
8E-41 |
KANADI family transcription factor 2 (KAN2) |
D0 → D5 |
2.1 |
- |
- |
| 1 |
6.1.20.1 |
27680 |
AT4G37750 |
2E-96 |
AINTEGUMENTA (ANT) |
D5 → D11 |
2.4 |
- |
- |
| 3 |
10.3.2.2 |
2388 |
AT1G08465 |
1E-41 |
YABBY family protein 2 (YAB2) |
D11 → D15 |
2.2 |
- |
- |
| 3 |
3.3.10.21 |
57615 |
AT1G12540 |
3E-13 |
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
D11 → D15 |
2.0 |
- |
- |
| D15 → D25 |
4.2 |
|
|
||||||
| 3 |
1.1.20.3 |
37794 |
AT3G49950 |
5E-46 |
GRAS family transcription factor |
D15 → D25 |
2.0 |
- |
- |
| 3 |
2.3.14.1 |
25514 |
AT1G52880 |
4E-53 |
ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 18 (ANAC018), NO APICAL MERISTEM/SEED MORPHOLOGY 2 (NAM/NARS2) |
D15 → D25 |
2.3 |
- |
- |
| 3 |
2.4.19.23 |
17360 |
AT1G22640 |
1E-150 |
MYB-type transcription factor 3 (MYB3) |
D15 → D25 |
2.3 |
- |
- |
| 3 |
2.4.7.21 |
2808 |
AT4G29230 |
7E-98 |
NAC-domain protein 75 (ANAC075) |
D15 → D25 |
2.4 |
- |
- |
| 3 |
3.1.19.21 |
12873 |
AT5G47390 |
4E-71 |
MYB-like transcription factor |
D15 → D25 |
2.0 |
- |
- |
| 3 |
3.2.1.2 |
16071 |
AT1G01720 |
7E-75 |
NAC-domain protein 2 (ANAC002), ATAF1 |
D15 → D25 |
2.7 |
- |
- |
| 3 |
4.4.11.10 |
270 |
AT3G20910 |
6E-31 |
Nuclear factor Y subunit A9 (NF-YA9) |
D15 → D25 |
2.0 |
- |
- |
| 3 |
5.2.18.9 |
16530 |
AT5G54680 |
1E-54 |
Basic helix-loop-helix (bHLH) 105 (BHLH105), LEUCINE RESISTANT 3 (ILR3) |
D15 → D25 |
4.1 |
- |
- |
| 2 |
1.3.17.22 |
8657 |
AT2G18160 |
2E-14 |
Basic leucine-zipper 2 (BZIP2), FLORAL TRANSITION AT THE MERISTEM 3 (FTM3) |
- |
- |
D0 → D5 |
3.3 |
| 2 |
5.1.1.2 |
37241 |
AT4G18170 |
2E-27 |
WRKY transcription factor 28 (WRKY28) |
- |
- |
D0 → D5 |
2.1 |
| 5 |
5.3.10.21 |
2451 |
AT4G30080 |
3E-151 |
Auxin response factor 16 (ARF16) |
- |
- |
D0 → D5 |
20.9 |
| 6 |
1.4.9.14 |
22607 |
AT3G24140 |
1E-51 |
bHLH superfamily protein FAMA |
- |
- |
D15 → D25 |
2.2 |
| 4 |
10.3.12.3 |
17529 |
AT2G12646 |
3E-67 |
PLATZ transcription factor family protein |
- |
- |
D15 → D25 |
3.0 |
| 6 |
3.3.17.13 |
7237 |
AT1G65620 |
1E-56 |
ASYMMETRIC LEAVES 2 (AS2) |
- |
- |
D15 → D25 |
3.2 |
| 4 |
4.3.3.12 |
4970 |
AT1G56170 |
4E-56 |
Nuclear factor Y subunit C2 (NF-YC2), HAP5B |
- |
- |
D15 → D25 |
2.7 |
| 4 |
4.4.11.2 |
18019 |
AT3G19500 |
2E-31 |
bHLH DNA-binding superfamily protein |
- |
- |
D15 → D25 |
2.5 |
| 1 | 6.4.7.23 | 1862 | AT1G68920 | 8E-56 | bHLH DNA-binding superfamily protein | - | - | D15 → D25 | 2.1 |