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. 2013 Oct 29;5(11):2155–2173. doi: 10.1093/gbe/evt162

Table 4.

Genes Not Covered by α-Blocks in Arabidopsis and Aethionema GS Pathway Inventory

Protein Namea AGI α-Block Evident SSDb AabIDc Syntelog % Identity Col-0 → Aabd
Side-chain elongation
    MAM1 AT5G23010 TD Aab12229 Yes 72.31 2 → 4
Aab12230 Yes 71.5 2 → 4
    MAM-L AT5G23020 TD Aab12225 Yes 70.67 2 → 4
Aab12226 Yes 68.36 2 → 4
TF regulation
    MYB34 AT5G60890 NA 6 → 4






66% TD (2/3) 100% TD (4/4) Ø 70.71%
0% GTD 0% GTD

aSquared brackets indicate ohnolog copies of GS biosynthetic genes without GO!-annotation to GS biosynthetic process.

bTD refers to members of TARs and GTD refers to a history of transposition in Arabidopsis.

cPredicted Aethionema CDS.

dChange of gene family locus count in Arabidospsis Aethionema order.