Table 3.

Common GO terms across all time-points post-injury

Term ID	Parent term name	Term ID	Child term name	GO level
GO:0009605	response to external stimulus	GO:0009991	response to extracellular stimulus	4
		GO:0009612	response to mechanical stimulus	4
GO:0050896	response to stimulus	GO:0009719	response to endogenous stimulus	3
GO:0006950	response to stress	GO:0009611	response to wounding	4
GO:0033993	response to lipid	GO:0032496	response to lipopolysaccharide	7
GO:0007599	hemostasis	GO:0007596	blood coagulation	6
GO:0002252	immune effector process	GO:0006956	complement activation	4
GO:0070482	response to oxygen levels	GO:0001666	response to hypoxia	6
GO:0048514	blood vessel morphogenesis	GO:0001525	angiogenesis	11
GO:0006979	response to oxidative stress	GO:0000302	response to reactive oxygen species	5
		GO:0042542	response to hydrogen peroxide	6
GO:0006954	inflammatory response	GO:0002367	cytokine production involved in immune response	5
GO:0001816	cytokine production	GO:0042089	cytokine biosynthetic process	5,8
GO:0001816	cytokine production	GO:0071706	tumor necrosis factor superfamily cytokine production	5
		GO:0032635	interleukin-6 production	5
		GO:0032637	interleukin-8 production	5
		GO:0050663	cytokine secretion	8
GO:0034097	response to cytokine stimulus	GO:0070555	response to interleukin-1	6
		GO:0034612	response to tumor necrosis factor	6
		GO:0034341	response to interferon-gamma	6
GO:0045087	innate immune response	GO:0034341	response to interferon-gamma	6
GO:0030595	leukocyte chemotaxis	GO:0030593	neutrophil chemotaxis	8
GO:0002275	myeloid cell activation involved in immune response	GO:0002281	macrophage activation involved in immune response	7
GO:0002274	myeloid leukocyte activation	GO:0042116	macrophage activation	6
GO:0012501	programmed cell death	GO:0006915	apoptotic process	5
GO:0006897	endocytosis	GO:0006909	phagocytosis	7
		GO:0006911	phagocytosis, engulfment	8
		GO:0043277	apoptotic cell clearance	8
GO:0050776	regulation of immune response	GO:0002218	activation of innate immune response	9
GO:0002758	innate immune response-activating signal transduction
GO:0002429	immune response-activating cell surface receptor signaling pathway	GO:0002220	innate immune response activating cell surface receptor signaling pathway	11
GO:0002758	innate immune response-activating signal transduction	GO:0002221	pattern recognition receptor signaling pathway	11
		GO:0002224	toll-like receptor signaling pathway	12
GO:0016337	cell-cell adhesion	GO:0007159	leukocyte cell-cell adhesion	5
GO:0007165	signal transduction
GO:0007166	cell surface receptor signaling pathway	GO:0007229	integrin-mediated signaling pathway	7
GO:0050900	leukocyte migration	GO:0045123	cellular extravasation	7
GO:0046649	lymphocyte activation	GO:0042113	B cell activation	6
		GO:0042110	T cell activation	6
GO:0046651	lymphocyte proliferation
GO:0042113	B cell activation	GO:0042100	B cell proliferation	7
GO:0046651	lymphocyte proliferation
GO:0042110	T cell activation	GO:0042098	T cell proliferation	7
GO:0030098	lymphocyte differentiation
GO:0042110	T cell activation	GO:0030217	T cell differentiation	11
GO:0002429	immune response-activating cell surface receptor signaling pathway	GO:0050851	antigen receptor-mediated signaling pathway	11
GO:0050851	antigen receptor-mediated signaling pathway	GO:0050853	B cell receptor signaling pathway	11
GO:0002460	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
GO:0019724	B cell mediated immunity	GO:0016064	immunoglobulin mediated immune response	7
GO:0044707	single-multicellular organism process	GO:0001503	ossification	4