Table 1.
Taxonomic classification of the 76 species from marine eight metazoan phyla (plus one alga species) sequenced with the primers LoboF1 and LoboR1
|
Species analyzed in this project |
Species from the BLAST search |
|||||
|---|---|---|---|---|---|---|
| Kingdom | Phylum | Class | Order | Genus/Species | Specimen / similarity (%) | GenBank Accession |
| Animalia |
Annelida |
Polychaeta |
|
Axiothella constricta |
Nicolea zostericola / 80 |
HQ024409 |
| |
|
|
|
Euclymene sp. |
Maldanidae sp. / 81 |
HQ023886 |
| |
|
|
|
Euclymene robusta |
Hyalinoecia sp. / 79 |
GQ497524 |
| |
|
|
|
Euclymene santandarensis |
Axiothella rubrocincta / 82 |
HM473326 |
| |
|
|
|
Leiochone leiopygos |
Axiothella rubrocincta /83 |
HM473326 |
| |
|
|
|
Praxillella praetermissa |
Axiothella rubrocincta / 80 |
HM473326 |
| |
|
|
|
Unidentified Orbiniidae |
Naineris laevigata / 77 |
GU362690 |
| |
|
|
Sabellida |
Sabella pavonina |
Branchiomma sp. / 87* |
ACF75771 |
| |
|
|
Spionida |
Scolelepis (Scolelepis) foliosa |
Spionidae sp. / 81 |
GU672502 |
| |
|
|
Phyllodocida |
Glycera alba |
Glycera sp. / 78 |
HM473389 |
| |
|
|
|
Hediste diversicolor |
Hediste diversicolor / 98 |
FJ030974 |
| |
Arthropoda |
Malacostraca |
Decapoda |
Deosergestes corniculum |
Eusergestes similis / 85 |
DQ882149 |
| |
|
|
|
Porcellana platycheles |
Anomura sp. / 87 |
HM464308 |
| |
|
|
|
Pestarella tyrrhena |
Anomura sp. / 84 |
HM465098 |
| |
|
|
|
Calappa granulata |
Calappa granulata / 99 |
JQ306054 |
| |
|
|
|
Calappa pelii |
Calappa granulata / 99 |
JQ306054 |
| |
|
|
|
Atelecyclus sp. |
Cancer bellianus / 86 |
JQ306131 |
| |
|
|
|
Macropodia sp. |
Macropodia rostrata / 99 |
JQ306016 |
| |
|
|
|
Pilumnus hirtellus |
Pilumnus hirtellus / 94 |
JQ306038 |
| |
|
|
|
Carcinus maenas |
Carcinus maenas / 99 |
FJ581593 |
| |
|
|
|
Lophozozymus incisus |
Hermodice carunculata / 98 |
AY495947 |
| |
|
|
|
Pinnotheres pisum |
Neosarmatium fourmanoiri / 85 |
FN392165 |
| |
|
|
|
Eualus cranchii |
Anomura sp. / 85 |
HM464348 |
| |
|
|
|
Oplophorus spinosus |
Oplophorus spinosus / 100 |
JQ306166 |
| |
|
|
|
Systellaspis debilis |
Systellaspis debilis / 99 |
JQ306181 |
| |
|
|
|
Systellaspis pellucida |
Systellaspis pellucida / 99 |
JQ306183 |
| |
|
|
|
Palaemon elegans |
Palaemon elegans / 99 |
JQ306030 |
| |
|
|
|
Chlorotocus crassicornis |
Chlorotocus crassicornis / 100 |
JQ305891 |
| |
|
|
|
Pandalina brevirostris |
Eumunida capillata / 82 |
EU243342 |
| |
|
|
|
Plesionika acanthonotus |
Plesionika acanthonotus / 99 |
JQ306170 |
| |
|
|
|
Plesionika heterocarpus |
Plesionika heterocarpus / 99 |
JQ306279 |
| |
|
|
|
Stylopandalus richardi |
Plesionika narval / 99 |
JQ305932 |
| |
|
|
|
Unidentified Paguridae |
Emerita analoga / 83 |
AF425302 |
| |
|
|
Amphipoda |
Ampithoe sp. |
Stenothoidae sp / 86 |
EF989710 |
| |
|
|
|
Caprella andreae |
Amphipoda sp. / 82 |
GQ260853 |
| |
|
|
|
Corophium sp. |
Cerodontha incisa / 80 |
EF104689 |
| |
|
|
|
Elasmopus rapax |
Amphipoda sp. / 82 |
HM466480 |
| |
|
|
|
Jassa sp.1 |
Jassa staudei / 82 |
EU243782 |
| |
|
|
|
Jassa sp.2 |
Jassa marmorata / 83 |
EU243747 |
| |
|
|
|
Maera inaequipes |
Amphipoda sp. / 82 |
HM465802 |
| |
|
|
|
Melita palmata |
Melita plumulosa / 79 |
JN790072 |
| |
|
|
|
Microdeutopus chelifer |
Amphipoda sp. / 83 |
HM466455 |
| |
|
|
Isopoda |
Idotea granulosa |
Idotea baltica / 90 |
FJ581714 |
| |
|
|
|
Idotea pelagica |
Idotea pelagica / 98 |
JQ425512 |
| |
|
|
|
Talitrus saltator |
Pseudorquestoidea brito / 91 |
JX094870 |
| |
Chordata |
Ascidiacea |
Stolidobranchia |
Microcosmus squamiger |
Microcosmus squamiger / 100 |
FJ528602 |
| |
|
|
|
Styela clava |
Styela clava / 99 |
FJ528636 |
| |
|
Actinopterygii |
Gobiesociformes |
Lepadogaster lepadogaster |
Dormitator maculatus / 82 |
AY722137 |
| |
|
|
Perciformes |
Pomatoschistus lozanoi |
Pomatoschistus tortonesei / 90 |
FJ751922 |
| |
|
|
|
Bassγ |
Dicentrarchus labrax / 100 |
FN689114 |
| |
|
|
|
Tunaγ |
Thunnus albacares / 99 |
GU451782 |
| |
|
|
Pleuronectiformes |
Solea senegalensis |
Solea senegalensis / 99 |
EU513739 |
| |
Cnidaria |
Anthozoa |
Pennatulacea |
Veretillum cynomorium |
Funiculina sp. / 96 |
JN227949 |
| |
Echinodermata |
Asteroidea |
Forcipulatida |
Marthasterias glacialis |
Marthasterias glacialis / 99 |
DQ077925 |
| |
|
Ophiuroidea |
Ophiurida |
Ophiothrix fragilis |
Ophiothrix fragilis / 98 |
EU583122 |
| |
|
Echinoidea |
Camarodonta |
Paracentrotus lividus |
Paracentrotus lividus / 99 |
EF462949 |
| |
Mollusca |
Bivalvia |
Nuculida |
Nucula sulcata |
Nucula sulcata / 100 |
DQ280017 |
| |
|
|
Arcoida |
Anadara sp. |
Anadara diluvii / 99 |
JF496763 |
| |
|
|
Mytiloida |
Mytilus edulis |
Mytilus edulis / 100 |
GU570521 |
| |
|
|
Pectinoida |
Anomia ephippium |
Anomia sp. / 70 |
GQ166573 |
| |
|
Cephalopoda |
Myopsida |
Alloteuthis media |
Alloteuthis media / 99 |
EU668087 |
| |
|
|
|
Loligo forbesi |
Loligo forbesi / 100 |
AF075402 |
| |
|
|
|
Loligo vulgaris |
Loligo vulgaris / 99 |
AF075397 |
| |
|
|
Sepiida |
Sepia officinalis |
Sepia officinalis / 99 |
EF416306 |
| |
|
|
Octopoda |
Argonauta argo |
Argonauta nodosa / 99 |
AY557517 |
| |
|
Gastropoda |
|
Osilinus sauciatus |
Osilinus sauciatus / 100 |
JN686313 |
| |
|
|
Littorinimorpha |
Vermetus triquetrus |
Peasiella mauritiana / 80 |
HE590850 |
| |
|
|
Neogastropoda |
Nassarius reticulatus |
Nassarius reticulatus / 99 |
EU827201 |
| |
|
|
|
Ocenebra erinaceus |
Ocenebra erinaceus / 100 |
AY995773 |
| |
|
|
Nudibranchia |
Armina maculata |
Dermatobranchus sp. / 85 |
HM162698 |
| |
|
|
Pleurobranchomorpha |
Berthella plumula |
Bathyberthella antartica / 84 |
AY345027 |
| |
|
Polyplacophora |
Chitonida |
Acanthochitona crinita |
Acanthochitona crinita / 86 |
AF120627 |
| |
|
|
|
Chaetopleura angulata |
Chaetopleura angulata / 100 |
AY377703 |
| |
|
|
Lepidopleurida |
Leptochiton algesirensis |
Leptochiton algesirensis / 93 |
HQ907849 |
| |
Nemertea |
Enopla |
Monostilifera |
Amphiporus sp. |
Amphiporus sp. / 89 |
EU255601 |
| |
Platyhelminthes |
Rhabditophora |
Polycladida |
Leptoplana tremellaris |
Pseudostylochus intermedius / 82* |
BAB39492 |
| Chromista | Ochrophyta | Phaeophyceae | Fucales | Fucus spiralis | Fucus vesiculosus var. spiralis / 100 | EU646757 |
*Amino acid sequence search because poor information is available about these taxa, γindicates common name (muscle tissue was provided without morphological identification to the species level).