Table 3. Analyses of molecular variance (AMOVA) of cpDNA and nrDNA data among clusters identified by Bayesian Analysis of Population Structure (BAPS) with cpDNA, nrDNA and concatenated data, as well as with the population clusters established by BAPS in the analysis with prior of 4 and 5 clusters.
BAPS clusters | Source of variation | Variation % | F-statisticsa |
cpDNA data | |||
5 clusters | Among groups | 83.4 | FCT = 0.83 |
Among populations within groups | 12.2 | FSC = 0.73 | |
Within populations | 4.4 | FST = 0.95 | |
7 clusters | Among groups | 75.6 | F CT = 0.75 |
Among populations within groups | 19.3 | FSC = 0.78 | |
Within populations | 5.1 | FST = 0.94 | |
4 clusters a priori | Among groups | 45.8 | FCT = 0.45 |
Among populations within groups | 49.2 | FSC = 0.90 | |
Within populations | 5.0 | FST = 0.95 | |
5 clusters a priori | Among groups | 76.2 | FCT = 0.76 |
Among populations within groups | 19.0 | FSC = 0.79 | |
Within populations | 4.8 | FST = 0.95 | |
nrDNA data | |||
6 clusters | Among groups | 71.7 | FCT = 0.71 |
Among populations within groups | 5.1 | FSC = 0.17 | |
Within populations | 23.2 | FST = 0.76 | |
7 clusters | Among groups | 71.2 | FCT = 0.71 |
Among populations within groups | 5.2 | FSC = 0.18 | |
Within populations | 23.6 | FST = 0.76 | |
4 clusters a priori | Among groups | 67.4 | FCT = 0.67 |
Among populations within groups | 11.2 | FSC = 0.34 | |
Within populations | 21.4 | FST = 0.78 | |
5 clusters a priori | Among groups | 68.2 | FCT = 0.68 |
Among populations within groups | 9.5 | FSC = 0.29 | |
Within populations | 22.3 | FST = 0.77 |
P-value<0.0001 for all analyses.
See methods and results for more details about the clusters.