Table 7.
Number of SNVs called by Atlas-SNP2 with different cutoffs of the posterior probability
| Posterior probability | SNVs | dbSNPs | Non-dbSNPs |
|---|---|---|---|
|
≥ 0.95 (original setting) |
448 |
321 |
127 |
|
≥ 0.3 |
476 |
342 |
134 |
| ≥ 0.1 | 539 | 393 | 146 |
Number of SNVs called by Atlas-SNP2 with different cutoffs of the posterior probability
| Posterior probability | SNVs | dbSNPs | Non-dbSNPs |
|---|---|---|---|
|
≥ 0.95 (original setting) |
448 |
321 |
127 |
|
≥ 0.3 |
476 |
342 |
134 |
| ≥ 0.1 | 539 | 393 | 146 |