Table 12.
Characteristics of mined sequential patterns in GSE11342 (SWS = variable, maxTC = ∞ days, minSupp = 95% and minTSupp = 100%)
| 0d | 3d | 6d | 9d | 12d | 15d | 18d | 21d | 24d | 27d | 30d | 33d | 36d | 39d | 42d | 45d | 48d | 51d | 54d | 57d | 60d | 63d | ≥ 66d | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| # of CTGR-SPs | 214 | 211 | 221 | 194 | 154 | 135 | 131 | 127 | 125 | 128 | 125 | 127 | 136 | 157 | 157 | 163 | 163 | 163 | 163 | 187 | 190 | 198 | 217 |
| # of longest CTGR-SPs | 28 | 25 | 25 | 82 | 37 | 17 | 17 | 14 | 10 | 13 | 13 | 7 | 10 | 157 | 157 | 163 | 163 | 163 | 163 | 187 | 190 | 198 | 217 |
| Maximal length of CTGR-SPs | 4 | 4 | 4 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| # of genes in CTGR-SPs | 136 | 134 | 136 | 134 | 127 | 124 | 123 | 121 | 120 | 121 | 119 | 121 | 125 | 132 | 132 | 132 | 132 | 132 | 132 | 136 | 136 | 136 | 136 |
| # of genes in longest CTGR-SPs | 3 | 3 | 3 | 15 | 10 | 9 | 9 | 9 | 7 | 8 | 5 | 5 | 4 | 7 | 7 | 7 | 7 | 7 | 7 | 7 | 7 | 7 | 7 |
| # of gene pairs in lonest CTGR-SPs | 21 | 19 | 19 | 59 | 26 | 16 | 16 | 14 | 10 | 12 | 10 | 10 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| -Log(p-value)†† | 1.26 | 1.37 | 1.37 | 0.70 | 0.00 | 0.00 | 0.00 | 0.00 | 0.86 | 0.86 | 0.65 | 0.53 | 0.40 | - | - | - | - | - | - | - | - | - | - |
d: # of days of SWS; ††: test longest CTGR-SPs-involved genes in immune response using GO enrichment analysis; -: no p-values.