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. 2013 Sep 26;14:24. doi: 10.1186/1471-2091-14-24

Table 1.

Differentially expressed proteins in Vitamin C treated AGS cells identified by MALDI-TOF/MS

Spot no. Swissprot entry name1 Protein name1 Accession number1 Theoretical/ experimental Mr (kDa)2 Theoretical/ experimental pI value2 Protein score3 Sequence coverage (%)/peptides matched Fold change
Up - regulated proteins
2
TNIP2_HUMAN
TNFAIP3-interacting protein 2
Q8NFZ5
49.24/91
6.03/5.83
56
15/7
2.3
3
XIRP1_HUMAN
Xin actin-binding repeat-containing protein 1
Q702N8
199.64/96
5.78/6.48
59
11/13
2.2
6
TXND5_HUMAN
Thioredoxin domain-containing protein 5
Q8NBS9
48.28/49
5.63/5.38
81
22/10
2.9
7
CE290_HUMAN
Centrosomal protein of 290 kDa
O15078
290.89/28
5.75/6.04
69
9/16
8.5
8
PRDX4_HUMAN
Peroxiredoxin-4
Q13162
30.75/24
5.86/5.43
68
38/6
3.0
9
CE290_HUMAN
Centrosomal protein of 290 kDa
O15078
290.89/23
5.75/5.21
60
8/15
6.4
Down - regulated proteins
1
DPP3_HUMAN
Dipeptidyl peptidase 3
Q9NY33
82.88/100
5.02/4.86
110
26/12
4.0
4
DCTN2_HUMAN
Dynactin subunit 2
Q13561
44.32/51
5.10/4.94
122
39/13
2.3
5
IF4A1_HUMAN
Eukaryotic initiation factor 4A-I
P60842
46.35/48
5.32/5.31
175
47/17
2.1
10
PSB6_HUMAN
Proteasome subunit beta type-6
PSMB6
25.57/21
4.80/4.64
104
39/10
4.4
11
EIF3K_HUMAN
Eukaryotic translation initiation factor 3 subunit K
Q9UBQ5
25.33/21
4.81/4.46
101
37/8
3.6
12
PSA5_HUMAN
Proteasome subunit alpha type-5
P28066
26.57/24
4.74/4.31
91
41/8
2.0
13
IF6_HUMAN
Eukaryotic translation initiation factor 6
P56537
27.10/23
4.56/4.13
86
50/7
3.8
14
1433Z_HUMAN
14-3-3 protein zeta/delta
P63104
27.9/25
4.73/4.36
93
40/10
2.6
15
1433S_HUMAN
14-3-3 protein sigma
P31947
27.87/25
4.68/4.26
150
58/12
2.2
16
1433E_HUMAN
14-3-3 protein epsilon
P62258
29.33/26
4.63/4.27
131
93/12
2.3
17
EF1B_HUMAN
Elongation factor 1-beta
P24534
24.92/26
4.50/4.12
130
50/11
3.3
18
TPM4_HUMAN
Tropomyosin alpha-4 chain
P67936
28.62/27
4.67/4.28
94
25/10
3.1
19
TPM3_HUMAN
Tropomyosin alpha-3 chain
P06753
32.86/27
4.68/4.37
95
20/11
2.7
20 PCNA_HUMAN Proliferating cell nuclear antigen P12004 29.09/29 4.57/4.28 127 40/10 2.5

1Entry name, protein name and accession number from SWISS-PROT database identified by MALDI-TOF/MS.

2Theoretical molecular weight (kDa) and pI from SWISS-PROT database; the experimental values of pI and MW for every isoelectric spot were calculated using Progenesis samespots software (Nonlinear Dynamics Ltd., Newcastle, UK).

3Score is −10*log (p), where p is the probability that the observed match is a random event, Protein scores greater than 56 are significant (p<0.05).