Table 1.
Results summary of sequencing and read mapping
| Cross | Cohort/pool | Read length(bp) | No. reads | Matched reads | Total bases matched | Approx. coverage | No. SNPs called |
|---|---|---|---|---|---|---|---|
| SICS/SRB |
F4 Unselected |
36 (paired) |
49,636,554 |
28,119,799 |
1,012,312,764 |
5× |
556,683 |
| SICS/SRB |
F4 Selected |
36 (paired) |
52,622,706 |
28,155,197 |
1,013,587,092 |
5× |
297,483 |
| SICS/SRA |
F19 Unselected |
75 (unpaired) |
7,944,144 |
6,443,622 |
483,271,650 |
2.4× |
310,852 |
| SICS/SRA | F19 Selected | 75 (paired) | 15,643,072 | 12,246,096 | 918,457,200 | 4.5× | 602,068 |